Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0870 ATGGAGAATCTTATGATGGTTGATGATACTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATTGAAGCAGAGGATCTGGAGAAGCGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAAAGGCAGAAGATTGCTGCACAGCAGGCTGCGGAGAAGCAGAAACCAAAACAGACATCCGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTATATGCTGAAACTGATGGAAGTATGCAAAGCCCGGGGATTTGTATATGGCATTATACCTGAAAAGGGGAAACCAGTTAGTGGTGCTTCTGATAACATTCGAGCATGGTGGAAAGAAAAAGTTAAATTCGATAAGAATGGACCGGCTGCAATAGCCAAGTATGAAGCAGAATGTCTTGCCAAGGGAGAGGCAGATGGCAATGGAAACAGTAATTCCCAAAGCGTTCTTCAAGACCTTCAGGATGCGACACTTGGGTCTCTTTTGTCTTCTTTGATGCAACATTGTGATCCCCCTCAGCGGAAGTACCCTTTAGAAAAGGGAGTTCCTCCACCCTGGTGGCCCTCTGGAAATGAAGATTGGTGGGCAAAACTTGGGCTATCCCATGGCAATAGTCCTCCTTATAAGAAGCCTCATGATTTGAAGAAGATGTGGAAAGTCGGGGTTTTAACAGCTGTGATAAAACATATGTCACCTGATATCGCAAAGATAAGGAGGCACGTACGGCAGTCAAAGTGCTTACAAGACAAGATGACAGCAAAGGAGAGTGCAATTTGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGACAACCAAGCAGTGATAATGGGGCATCTGGAATAACAGAGACCCCAGTAGGTGGTCGTGGTGAAAAGCAAGCTGCAGTAACTAGTGACAGTGATTATGATGTTGATCTTGCTGATGATGGTGTCGGGTCAGTTTCTTCTAAAGACAGGAGAAATCGATCAGTGGATGCAGAGCCATCCAGTAATCTTGGCAATAATGATCCTCAACCTGCTCAAGGAAAAGAGCAAGGTGAAAAGCATAGAAGAAAAAGACAACGTAGTAGCAGGACAAAACCTGCCGATCAAACACTGGCTCCATCTCGGAATGAAGAAGAACCAGGAATCGAACCAACAAATACTCATCTAGATATAAACCATTCTGATGTACCATTAGATAGATTTGAAATTTCAGGAAACCAACCGCAAATTGATACTGTCACAGCTTTGAGGCCACTGGAGAAGGATATGGATGTCCGATCAGAAGTACCAGCTCCCCGGTTTAACATGTTCTCCACGACGTCCTCAAATAATATCAACATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATGCTGAGGCGCAACATGAAAGTGCTTACAATATATATAATCCACCAGTGGAATATAGATCCAATTATGATGTGCAGCACCCTCAATTTGTTAATGAGCCTCAAATGAGATTGGAGGAAGGAGCGCATGTGCCAACACAACATAGAAACGATGAGATTATAGGAGGAGATTTCAACTATGTAAAAGAAACGTTCAACACTGAACAAGATAGGCCTGTTGATACACAGTTTGGATCACCAATCAACAGTCTCTCATTAGATTATGGAGCATTTAATAGTCCGTTCCATCTTGGAATCGATGGTGCAAGCTCGTTTGATGACTTTTTGGTTGATGACGATTTGATCCAATACTTCGGAGCTTAG 1809 42.84 MENLMMVDDTLGDCSDMEVDDIRCDNIAEKDVSDEEIEAEDLEKRMWKDRIKLKRIKERQKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGEADGNGNSNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWAKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGEKQAAVTSDSDYDVDLADDGVGSVSSKDRRNRSVDAEPSSNLGNNDPQPAQGKEQGEKHRRKRQRSSRTKPADQTLAPSRNEEEPGIEPTNTHLDINHSDVPLDRFEISGNQPQIDTVTALRPLEKDMDVRSEVPAPRFNMFSTTSSNNINIISTQSMYVDGRPLLYPVMQNAEAQHESAYNIYNPPVEYRSNYDVQHPQFVNEPQMRLEEGAHVPTQHRNDEIIGGDFNYVKETFNTEQDRPVDTQFGSPINSLSLDYGAFNSPFHLGIDGASSFDDFLVDDDLIQYFGA 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 60008748 60011761 - Tan0005285.2 Tan09g0870 763213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0870 602 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 565 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Tan09g0870 602 MobiDBLite consensus disorder prediction 62 85 - -
Tan09g0870 602 FunFam Ethylene insensitive 3-like 1 161 297 - -
Tan09g0870 602 Pfam Ethylene insensitive 3, DNA-binding domain 40 287 IPR047091 GO:0003700(InterPro)
Tan09g0870 602 MobiDBLite consensus disorder prediction 347 362 - -
Tan09g0870 602 FunFam Ethylene insensitive 3-like 1 74 152 - -
Tan09g0870 602 MobiDBLite consensus disorder prediction 289 407 - -
Tan09g0870 602 Coils Coil 25 59 - -
Tan09g0870 602 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan09g0870 602 Gene3D - 74 152 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan09g0870 602 Gene3D - 159 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0870 Tan-Chr9:60008748 Tan11g1054 Tan-Chr11:8290917 9.50E-96 dispersed
Tan09g0869 Tan-Chr9:60008748 Tan09g0870 Tan-Chr9:60008748 0.00E+00 tandem
Tan09g0870 Tan-Chr9:60008748 Tan09g0871 Tan-Chr9:60008748 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28306 PF04873 EIN3 2.00E-127 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0870 K14514 - csv:101210347 1045.03