Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0896 ATGGAAGACGAAGCTTCCTCCACCTTCCTTTCCCTCACTAGGACCCCTCTCCTCACAGATGAAGTTACAGATTCTAATTTCTCAGATTATGTCATACCTGGAGCCAAGCGGCCGAGATTCGACCACGATCTTAATGATGTACCCGCCGTCGGGAAATTCAAAGGTGTAGTGCCTCAGCAGAACGGCCGTTGGGGAGCGCAGATCTATGCCAACCACCAGAGGATCTGGCTCGGCACCTTCAAGTCGGAGAAGGAAGCCGCCATGGCTTACGATAGTGCCGCTATCAAGCTTCGAACCAGAGATTCTCACCGGAATTTCCCCTGGACTCACCAATCAATCGAGGAGCCGAATTTTCAAGTCAAATTCTCCACAGACGCTGTTCTGAGCATGATCAAAGATGGATCGTATTCCTCGAAATTTTCCGCCTATTTAAGAACGAAATCTCAAATTGGCGACTTGAATTTACAGAATCCCCAAACTTTCGACAATGGCGACGGCGACGGCCATTTCTCTTGCAGCCATCTGTTCCAGAAGGAATTAACACCGAGCGACGTCGGGAAGCTCAATCGACTCGTAATCCCTAAAAAATACGCAGTGAAACACTTTCCGTACATCAGCGAGAGCGCAGAGGAGAACGGCGACGACATAGAAATCGTCTTCTACGATACGTCGATGAAGACATGGAAGTTCCGATACTGTTACTGGAGGAGCAGCCAGAGCTTCGTCTTCACCAGAGGCTGGAATCGATTCGTTAAGGAGAAGAAACTGAAGGCGAACGACATCATCACGTTTTACACATACGAAAGCTGCGGAAGAGACGAAAATGGCGGAACATTGAACTTCATAGACGTTATCTACAAGAAACCGGAAGATGATCAGAGCGAGAGTAGTTGCTTAGCGGCGGAGAAAGAGAGTATTAAGAACGAAAAATTGCAGAGTGAATTAGGGCTTGATCGGGAGAAGGACAGTGAGAAGAAGAAGAAGGAGGAGAAGGAGATTTTGAACTGTGGAAAATCGAACCCTAATGATCAAAATGTTGGGGCAAAGCGAATTAGGCTATTTGGACCGATGTCGACAACAGCAGCCTCTAATCTTCAGATGGCGACATTGAGACACTGCAAGTTCTCTTCTCCAAAGGGTTTCAAGGATGTTGTTACGCCAGCTCTTGGTGGCAATTCAAAGCCAATGCCATGGGCTAAACTTAGGAGTGTCTACAATATATCCTCTTTGAAATACATTCAGCTGAATTCTACCACTTTATCTTCTACAAAATTTGGGAAGATTGCAATTAAAGCTATGTCTGGATCTAGTGAAAACACACCAATCTCTGGGTTGCCTGTTGATTTAAAAGGTAAGCGGGCATTTATTGCTGGTGTAGCTGATGACAATGGTTATGGTTGGGCAATAGCAAAATCTCTTGCTGCTGCTGGAGCTGAAATCATTGTCGGCACGTGGGTGCCTGCTTTGAACATCTTTGAATCCAGCTTGCGACGTGGAAAGTTCAATGAATCTCGATTATTGCCAGATGGATCTTTAATGGAGATCACCAAAATATATCCCCTGGATGCAGTTTTTGACAATCCTGAGGATGTTCCTGAAGATATAAAAACAAATAAGCGGTATGCAGGTTCCACTAATTGGACAGTTCAGGAAGTAGCAGAATCAGTGAAGAAGGATTTTGGAACCATTGACATCCTTGTGCATTCACTTGCAAATGGGCCAGAGGTAAGTAAACCTCTCTTAGAGACATCCAGGAAAGGTTACCTAGCGGCTTTATCTGCATCAAGTTACTCCTACATTTCACTTCTTAAGCATTTCGTTCCAATAATGAATCCAGGTGGTTCGTCAATCTCTCTTACGTACATTGCTTCTGAAAGGATCATTCCTGGATATGGTGGAGGTATGAGTTCAGCAAAAGCTGCACTGGAGAGTGACACACGAGTGCTTGCTTTCGAGGCGGGTCGAAAAAACAAGATCAGAGTGAACACCATATCTGCTGGTCCACTTAGAAGTCGTGCAGCAAAAGCTATCGGATTCATCGATATGATGATTGACTATTCACTAGCAAATGCACCTCTGCAGAAAGAATTATCTGCAGAGGAGGTGGGGAATGCAGCTGCCTTCTTGGCATCTCCTTTAGCTTCTGCCATAACTGGTTCTGTTATCTATGTCGACAATGGTTTGAACGCAATGGGGGTGGGCGTTGATAGCCCGATATTTGAAGGACTTTGA 2232 45.34 MEDEASSTFLSLTRTPLLTDEVTDSNFSDYVIPGAKRPRFDHDLNDVPAVGKFKGVVPQQNGRWGAQIYANHQRIWLGTFKSEKEAAMAYDSAAIKLRTRDSHRNFPWTHQSIEEPNFQVKFSTDAVLSMIKDGSYSSKFSAYLRTKSQIGDLNLQNPQTFDNGDGDGHFSCSHLFQKELTPSDVGKLNRLVIPKKYAVKHFPYISESAEENGDDIEIVFYDTSMKTWKFRYCYWRSSQSFVFTRGWNRFVKEKKLKANDIITFYTYESCGRDENGGTLNFIDVIYKKPEDDQSESSCLAAEKESIKNEKLQSELGLDREKDSEKKKKEEKEILNCGKSNPNDQNVGAKRIRLFGPMSTTAASNLQMATLRHCKFSSPKGFKDVVTPALGGNSKPMPWAKLRSVYNISSLKYIQLNSTTLSSTKFGKIAIKAMSGSSENTPISGLPVDLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEIIVGTWVPALNIFESSLRRGKFNESRLLPDGSLMEITKIYPLDAVFDNPEDVPEDIKTNKRYAGSTNWTVQEVAESVKKDFGTIDILVHSLANGPEVSKPLLETSRKGYLAALSASSYSYISLLKHFVPIMNPGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKNKIRVNTISAGPLRSRAAKAIGFIDMMIDYSLANAPLQKELSAEEVGNAAAFLASPLASAITGSVIYVDNGLNAMGVGVDSPIFEGL 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 60445322 60454507 - Tan0020055.1 Tan09g0896 763239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0896 743 SMART B3_2 176 285 IPR003340 GO:0003677(InterPro)
Tan09g0896 743 CDD B3_DNA 174 281 IPR003340 GO:0003677(InterPro)
Tan09g0896 743 CDD AP2 52 109 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan09g0896 743 ProSiteProfiles AP2/ERF domain profile. 52 107 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan09g0896 743 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 357 742 IPR014358 GO:0004318(InterPro)|GO:0006633(InterPro)
Tan09g0896 743 Gene3D - 165 284 IPR015300 -
Tan09g0896 743 MobiDBLite consensus disorder prediction 310 342 - -
Tan09g0896 743 ProSiteProfiles B3 DNA-binding domain profile. 176 288 IPR003340 GO:0003677(InterPro)
Tan09g0896 743 PRINTS Glucose/ribitol dehydrogenase family signature 692 712 IPR002347 -
Tan09g0896 743 PRINTS Glucose/ribitol dehydrogenase family signature 635 654 IPR002347 -
Tan09g0896 743 PRINTS Glucose/ribitol dehydrogenase family signature 561 572 IPR002347 -
Tan09g0896 743 PRINTS Glucose/ribitol dehydrogenase family signature 657 674 IPR002347 -
Tan09g0896 743 Gene3D - 452 678 - -
Tan09g0896 743 Pfam B3 DNA binding domain 176 266 IPR003340 GO:0003677(InterPro)
Tan09g0896 743 SUPERFAMILY DNA-binding pseudobarrel domain 174 269 IPR015300 -
Tan09g0896 743 MobiDBLite consensus disorder prediction 310 336 - -
Tan09g0896 743 Pfam Enoyl-(Acyl carrier protein) reductase 548 729 - -
Tan09g0896 743 Gene3D Enoyl acyl carrier protein reductase 679 736 - -
Tan09g0896 743 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 452 678 - -
Tan09g0896 743 FunFam AP2 domain-containing protein RAP2.8 51 108 - -
Tan09g0896 743 Gene3D AP2/ERF domain 52 108 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan09g0896 743 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 450 732 IPR036291 -
Tan09g0896 743 SMART rav1_2 52 113 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan09g0896 743 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 680 735 - -
Tan09g0896 743 SUPERFAMILY DNA-binding domain 52 108 IPR016177 GO:0003677(InterPro)
Tan09g0896 743 CDD ENR_SDR 451 732 IPR014358 GO:0004318(InterPro)|GO:0006633(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1845 Tan-Chr6:44839824 Tan09g0896 Tan-Chr9:60445322 1.50E-24 dispersed
Tan09g0896 Tan-Chr9:60445322 Tan11g1931 Tan-Chr11:29672929 3.20E-45 dispersed
Tan09g1552 Tan-Chr9:67365045 Tan09g0896 Tan-Chr9:60445322 2.40E-83 transposed
Tan07g0693 Tan-Chr7:10886000 Tan09g0896 Tan-Chr9:60445322 3.80E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28308 PF13561 adh_short_C2 8.10E-50 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0896 K00208 - csv:101217385 673.315