Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0929 | ATGTTCGGGATTGTGGCGGAGGCGGTGACCGTGGCGGTCGTGGCGGTCGGGTGGTTGTTATGTGGAATCGAGGGTAGACATCCGGTGATGCATAAGGTTGGAGGAGGAAAATATACATGGACAACTAATATTAACTTCACTCATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAGCATATCTACAACGTGCTCGAAGTGAACAAAACAAGCTATGAGAGTTGCAATGAAAAGGATTTCATTTTGAACATAACAAAAGGAGGAAGAGATGTGTTCAATCTAACAGAAGCAAAGCCATATTACTTTCTAAGTGGAAGAGGGTTTTGCTTTCAAGGAATGAAGGTTGCTGTCTTTGTTGAAGAATCTCCTCCCCCTTCTCCCATTTCACCACCAAAAATTTCCAATTTTTCTCCATCTATACAACCATTATTATTATTGCCTTTCTCCTTCTTTCTACTCACCATTATTAGGGGTATTATTGATAGAATAATTATATATATATATATATGTTGA | 537 | 38.92 | MFGIVAEAVTVAVVAVGWLLCGIEGRHPVMHKVGGGKYTWTTNINFTHWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFILNITKGGRDVFNLTEAKPYYFLSGRGFCFQGMKVAVFVEESPPPSPISPPKISNFSPSIQPLLLLPFSFFLLTIIRGIIDRIIIYIYIC | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 61293572 | 61295803 | - | Tan0020895.1 | Tan09g0929 | 763272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0929 | 178 | FunFam | Lamin-like protein | 27 | 130 | - | - | |
Tan09g0929 | 178 | ProSiteProfiles | Phytocyanin domain profile. | 29 | 129 | IPR003245 | GO:0009055(InterPro) | |
Tan09g0929 | 178 | PANTHER | BLUE COPPER PROTEIN | 15 | 128 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Tan09g0929 | 178 | SUPERFAMILY | Cupredoxins | 29 | 127 | IPR008972 | - | |
Tan09g0929 | 178 | Gene3D | - | 29 | 131 | IPR008972 | - | |
Tan09g0929 | 178 | Pfam | Plastocyanin-like domain | 40 | 121 | IPR003245 | GO:0009055(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1428 | Tan-Chr2:54276178 | Tan09g0929 | Tan-Chr9:61293572 | 1.50E-28 | dispersed | |
Tan07g1189 | Tan-Chr7:44194854 | Tan09g0929 | Tan-Chr9:61293572 | 1.90E-36 | dispersed | |
Tan07g1192 | Tan-Chr7:44954370 | Tan09g0929 | Tan-Chr9:61293572 | 1.90E-36 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0929 | - | - | - | 0.0 |