Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0929 ATGTTCGGGATTGTGGCGGAGGCGGTGACCGTGGCGGTCGTGGCGGTCGGGTGGTTGTTATGTGGAATCGAGGGTAGACATCCGGTGATGCATAAGGTTGGAGGAGGAAAATATACATGGACAACTAATATTAACTTCACTCATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAGCATATCTACAACGTGCTCGAAGTGAACAAAACAAGCTATGAGAGTTGCAATGAAAAGGATTTCATTTTGAACATAACAAAAGGAGGAAGAGATGTGTTCAATCTAACAGAAGCAAAGCCATATTACTTTCTAAGTGGAAGAGGGTTTTGCTTTCAAGGAATGAAGGTTGCTGTCTTTGTTGAAGAATCTCCTCCCCCTTCTCCCATTTCACCACCAAAAATTTCCAATTTTTCTCCATCTATACAACCATTATTATTATTGCCTTTCTCCTTCTTTCTACTCACCATTATTAGGGGTATTATTGATAGAATAATTATATATATATATATATGTTGA 537 38.92 MFGIVAEAVTVAVVAVGWLLCGIEGRHPVMHKVGGGKYTWTTNINFTHWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFILNITKGGRDVFNLTEAKPYYFLSGRGFCFQGMKVAVFVEESPPPSPISPPKISNFSPSIQPLLLLPFSFFLLTIIRGIIDRIIIYIYIC 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 61293572 61295803 - Tan0020895.1 Tan09g0929 763272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0929 178 FunFam Lamin-like protein 27 130 - -
Tan09g0929 178 ProSiteProfiles Phytocyanin domain profile. 29 129 IPR003245 GO:0009055(InterPro)
Tan09g0929 178 PANTHER BLUE COPPER PROTEIN 15 128 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Tan09g0929 178 SUPERFAMILY Cupredoxins 29 127 IPR008972 -
Tan09g0929 178 Gene3D - 29 131 IPR008972 -
Tan09g0929 178 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1428 Tan-Chr2:54276178 Tan09g0929 Tan-Chr9:61293572 1.50E-28 dispersed
Tan07g1189 Tan-Chr7:44194854 Tan09g0929 Tan-Chr9:61293572 1.90E-36 dispersed
Tan07g1192 Tan-Chr7:44954370 Tan09g0929 Tan-Chr9:61293572 1.90E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0929 - - - 0.0