Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1055 ATGGCACTCTCCATTTCTTCCACTGCGCTCTCGACCCTCCCACTCAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGATTCTTCTCATCTGAACGCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCAGTGGCCGGAATCCTGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTTGCTGGTAGCGCAACTGGCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCAAAGCCCGACGTGGGCTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGGCGGTTGGCGATGTTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACATTTTTTCGGCGTTCAGGTCGGGTTGA 795 58.36 MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 62798005 62799959 + Tan0018512.1 Tan09g1055 763398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1055 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 258 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Tan09g1055 264 Pfam Chlorophyll A-B binding protein 68 234 IPR022796 -
Tan09g1055 264 SUPERFAMILY Chlorophyll a-b binding protein 58 261 - -
Tan09g1055 264 Gene3D Chlorophyll a/b binding protein domain 69 254 - -
Tan09g1055 264 FunFam Chlorophyll a-b binding protein, chloroplastic 69 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1249 Tan-Chr2:32299137 Tan09g1055 Tan-Chr9:62798005 6.10E-36 dispersed
Tan04g0044 Tan-Chr4:410879 Tan09g1055 Tan-Chr9:62798005 2.60E-85 dispersed
Tan05g2431 Tan-Chr5:75463232 Tan09g1055 Tan-Chr9:62798005 7.50E-55 dispersed
Tan09g0704 Tan-Chr9:56612610 Tan09g1055 Tan-Chr9:62798005 1.40E-41 dispersed
Tan09g1055 Tan-Chr9:62798005 Tan11g0846 Tan-Chr11:6949329 6.10E-39 dispersed
Tan09g1055 Tan-Chr9:62798005 Tan09g2110 Tan-Chr9:71467726 1.20E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1055 K08908 - csv:101211430 489.574