Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1102 | ATGGCGGATAAGAAAGGAACGGAACAAGTTGTTTTACGTATTTTGGATGGTGAAGGAGCAGTTGATGGGAGTAAAGATTTCCCTAAAAGCTCTGTTGCTTCTTTTCCTGATTTTGAGCTAAAAGAAACTCGGAGTTTTAGATGCACAATTCCACAATCCGTGGTTGGGAGCTCTCCTTCACATGAGATTTCTAGAATGAGTCCCCTTAAACCTCCAAAAATTCCGGTTGAATCAGCAGTTCGGCGTCCATCATTGGCTCGTTCGTCGTTTTCAAAGTCGAAATCAAGGCTAGTAGAGCCGCCTTGTCCTGATGGTCTGAGTTTGGCAGAAGAAAAAACTCAAGCAAAATCAACGTCTGGTTCAGCATTTTATAGCTCTCCGAAGATGGACTCCCCAGCTAAGATAACCACTGCGACTAGTCCTAGAGAAGCTTTGAAGTCGGCCCCGATAACTCCTAAAACGCCATTGATTGGATCTACTGGAAGTGAGGAGGAAGATGATGAAGAAGTTTATAGAACTGCAGAACTGAAAGTGAAAGAAAGATCAGGGAAGAAGTTGAAAAGGACCATTTTAATTGAATGGGTTGCATTTTTGTGCTTGACGGGGTGTTTGATTGCTAGCTTAACAGTAGAGAAGTTGGTGACTAAAGAGATCTGGGGATTAGGGATGTGGAAATGGTGTGTTCTGGTATTAGTTATTTTCTGTGGTCGTTTATTTTCACAATGGTTTATCAATATTCTGGTTTTCTTGATTGAAAGGAACTTTCTACTTAAAAGAAAGGTTCTATATTTTGTCTATGGGCTGAGGAAGAGTGTCATAATTTTTATTTGGCTGGCTTTGGTTCTTCTAGCGTGGGGTCTATTATTTGATCAAAGCAGCAAGAGATCTAAGAAAGGTAATGAGATTCTGAATTATGTTACACGAGCTCTTGGTGCTTCTCTTATTGGGGCAGCATTATGGCTGGTGAAAACTTTGCTGGTGAAGATACTAGCTGCTTCTTTTCAATGCGCTAGATTCTTCGATCGGATTCAAGAATCCATCTTCCATCAGTATATCCTCCGCACTCTATCAGGACCTCCACTGATGGAGATGGCTGAGAGGGTCGGGAGAGCGGCAAGCACAGGGCAGTTGAGTTTCAGGCATTTGAAGAAAGAAAGTGATGGTGGGAATGAAGGGAAGGAAGAGGTGATTGATGTAGATAAACTCAAAAAGATGAAGCAAGAAAAAATCTCTGCTTGGACCATGAGAGGGCTAATCAATGTTATAAGGAGTTCAGGGCTGTCCACCATCTCTAATACAATAGAGAATTTTAAAGAGGAAGAGGTTGAGCAAAAAGATAAGGAGATTAACAGTGAATGGGAAGCAAGGGCTGCAGCTTACCAAATTTTCAGGAACGTCGCAAAACCTGGTAGCAAGTATATTGATGAAGAGGACCTCTTTCGTTTTATGAGTAAGGAGGAAGTTGATAATGTGCTGCCATTGTTTGAAGGAGCAGTTGAGACCGGGAAGATAAAACGAAAATCCCTGAAGAATTGGCTGGTGAATGTTTATGTCGAACGCAAGTCGCTCGCCCACTCATTGAATGACACCAAGACTGCAATAGAGGAGCTAAACAAGCTTGCATCTGCACTTGTATTGATCGTGATTATCATTGAATGGCTACTTCTGATGGGTTTCTTGACGACGCAAGTACTCGTCTTCATTTCGTCACAGCTTCTGCTGGTGGTTTTCATGTTTGGTAACACTGCCAGAACCGTATTTGAAGCCATCATATTCGTATTTGTAATGCATCCATTTGATGTGGGGGATCGTTGTGTTGTAGATGGTGTGCAGATGATTGTTGAAGAAATGAACATTTTAACCACAATTTTCTTGAGATATGACAATGAGAAGATCTTCTATCCAAATTCTGTTCTTGCCACCAAACCCATCAGTAACTTCTACAGGAGCCCCGAAATGAGCGATTCGATTGAATTTTCTGTTGATTTTTCCACGTCAATTGAAAGCATTGGAGCTCTAAAAGCAAGAATAAAATCATACATCGAAAGCAAACCGCAGTTCTGGCGCCCAAACCATAGTATCCTCGTGAAGGAGATCGAGAATGTCAACAAGATGAAAATGGGTCTATACGTCAATCACACCATAAACTTTCAGAACTATGGCGACAAGAGCAGTCGCAGATCGGAACTAGTCTTGGAGATGAAGAAAATTTTCGAAGATCTTGGCATCAAGTATCATCTGCTACCTCAAGAAGTTCAGCTCAACTATGTGAGTTCAGCAGCTCCTATGGTTCCACCCTCGAGGAGATGA | 2310 | 41.82 | MADKKGTEQVVLRILDGEGAVDGSKDFPKSSVASFPDFELKETRSFRCTIPQSVVGSSPSHEISRMSPLKPPKIPVESAVRRPSLARSSFSKSKSRLVEPPCPDGLSLAEEKTQAKSTSGSAFYSSPKMDSPAKITTATSPREALKSAPITPKTPLIGSTGSEEEDDEEVYRTAELKVKERSGKKLKRTILIEWVAFLCLTGCLIASLTVEKLVTKEIWGLGMWKWCVLVLVIFCGRLFSQWFINILVFLIERNFLLKRKVLYFVYGLRKSVIIFIWLALVLLAWGLLFDQSSKRSKKGNEILNYVTRALGASLIGAALWLVKTLLVKILAASFQCARFFDRIQESIFHQYILRTLSGPPLMEMAERVGRAASTGQLSFRHLKKESDGGNEGKEEVIDVDKLKKMKQEKISAWTMRGLINVIRSSGLSTISNTIENFKEEEVEQKDKEINSEWEARAAAYQIFRNVAKPGSKYIDEEDLFRFMSKEEVDNVLPLFEGAVETGKIKRKSLKNWLVNVYVERKSLAHSLNDTKTAIEELNKLASALVLIVIIIEWLLLMGFLTTQVLVFISSQLLLVVFMFGNTARTVFEAIIFVFVMHPFDVGDRCVVDGVQMIVEEMNILTTIFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDSIEFSVDFSTSIESIGALKARIKSYIESKPQFWRPNHSILVKEIENVNKMKMGLYVNHTINFQNYGDKSSRRSELVLEMKKIFEDLGIKYHLLPQEVQLNYVSSAAPMVPPSRR | 769 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 63336187 | 63339203 | - | Tan0010204.1 | Tan09g1102 | 763445 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1102 | 769 | MobiDBLite | consensus disorder prediction | 52 | 134 | - | - | |
Tan09g1102 | 769 | Gene3D | - | 598 | 647 | IPR023408 | - | |
Tan09g1102 | 769 | MobiDBLite | consensus disorder prediction | 111 | 134 | - | - | |
Tan09g1102 | 769 | PIRSF | Memb_At2g17000 | 19 | 768 | IPR016688 | - | |
Tan09g1102 | 769 | SUPERFAMILY | Sm-like ribonucleoproteins | 588 | 647 | IPR010920 | - | |
Tan09g1102 | 769 | FunFam | Predicted mechanosensitive ion channel | 598 | 647 | - | - | |
Tan09g1102 | 769 | Pfam | Mechanosensitive ion channel, beta-domain | 591 | 647 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan09g1102 | 769 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 67 | 759 | IPR016688 | GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)|GO:0050982(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3463 | Tan-Chr1:99949559 | Tan09g1102 | Tan-Chr9:63336187 | 5.10E-184 | dispersed | |
Tan05g1092 | Tan-Chr5:9643270 | Tan09g1102 | Tan-Chr9:63336187 | 5.90E-153 | dispersed | |
Tan05g1093 | Tan-Chr5:9643270 | Tan09g1102 | Tan-Chr9:63336187 | 3.40E-73 | dispersed | |
Tan06g2243 | Tan-Chr6:73248345 | Tan09g1102 | Tan-Chr9:63336187 | 4.40E-177 | dispersed | |
Tan09g1100 | Tan-Chr9:63325822 | Tan09g1102 | Tan-Chr9:63336187 | 1.20E-299 | dispersed | |
Tan09g1101 | Tan-Chr9:63325822 | Tan09g1102 | Tan-Chr9:63336187 | 3.90E-296 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1102 | K22048 | - | csv:101209209 | 1312.75 |