Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1108 ATGGCCAACTGTGAATCTTTCTGCTCCTCACCTCTTTTCGAAACCGATTCAGTTCCTCAATCAAAATCCTTTTCCTCTGTTTCGGCCTCCGACCATTGGGTCAAGGCTGCCAACGCTCTCAGCCACCCCCATTTTGAGGAGGTTTGTCGCATGGTGTCAGAGTTTCAAGAGGCTCAAACTGTTGACATCGAAGGCACCACCCTCACCGTCGCTCAGGTCACTGCCATTGCTCGTCGAAGCGATGTCAAAGTTAACCTGAATGATACCGTGGCCCGTGATCGTGTGGCCAAAAGTGCAAATTGGGTTGCAGAGAAAATCTCTCGTGGAATTGATATATATGGAGTTACCACCGGCTTCGGTGCCACCTCCCACAGGCGTACGACCAAAACAGCCGACCTCCAGACAGAGCTCATTAGGTTCCTTAATGCCGGAGTCATTGGAAAGGACAATCTTCCATCCAGCTACTCAAAGGCAGCCATGCTTGTTAGAACAAACACATTGATGCAAGGTTACTCGGGCATTCGTTGGGAAATTCTTGAAGCTGTGGTGAAGCTCATGAATGAGAATTTGATCCCTAAATTGCCTTTGAGAGGGACAATTACAGCTTCTGGAGATCTTGTTCCACTGTCTTATATCGCTGGTGTTATCACTGGTAGGCATAATTCCAAGGTTACCACCATGGAAGGCGATGAGATCACTGCCATGGAAGCTCTGAAGAGAGCTGGAATTGCAGGCCCATTTGAGCTTCAAGCAAAGGAAGGTTTAGCTCTTGTCAACGGAACCGCCGTCGGGTCTGCCGTTGCTGCCACAGTCTGCTACGATGCCAACCTTTTGGCTCTTCTAGCCGTCGTTCTCTCTGCTTTGTTCTGTGAAGCCATGCTCGGGAAGCCAGAATTTGCAGACCCATTAACCCATAAGCTCAAGCACCACCCTGGCCAGATTGAATCCGCCGCCGCCATGGAGTTTCTCTTGGATCAAAGCGACTTTATGAAAGAAGCAAAAATCCGCCATGAAAATGACCCATTGACAAAGCCAAAACAAGATCGCTATGCACTCCGAACTTCTCCTCAATGGCTTGGACCTCAAATCGAAGTCATTCGAATGGCAACCCAATCGATTGAAAGGGAAATAAACTCTGTAAATGATAACCCATTAATCGATGTCAATCGGGACCTAGCTCTACATGGAGGAAACTTTCAGGGAACCCCAATCGGCGTCTCCATGGATAACCTCCGAATCGCCATTGCTGCAATTGGAAAACTAATCTTCGCCCAATTCTCCGAACTCGTCTGTGATCATTACAACAATGGATTGCCATCTAATTTGAGCGCCGGGCCAAACCCTAGCTTGGATTACGGCTTCAAAGGGGCGGAAATCGCCATGGCTGCTTATTGCTCTGAGCTCCAATACCTAGCCAACCCTGTCACAACCCATGTCCAGAGTGCAGAACAACACAATCAAGATGTAAACTCTCTAGGTCTAATCTCAGCCAGAAAATCTGCCGAAGCCATTGAAATTCTCAAGCTCATGTCCGCTACATACATGGTAGCGCTCTGCCAGGCGATCGATTTAAGACAATACGAAGAAAACATGAGGGAAGTTGTGAAAAATTCCCTTCTACAAACCATCAGAAGAACCCTATATGTTGCAGAATACGGATCTCTTCTCGAATCGCGATTCTGCGAGAAAGATCTACTGCAAGTAATCGAGCGCGAGGCTGTTTTCTCCTACATCGACGATCCAACCAACACTTCCTATCCCCTATTCCCCAAATTACTGGAAGTTCTGGTCGGAAGAGCGTTGAAAGGCGTTGGAACAGTCAAAAGCGAGAATGGAAATGAAACAGGCATCGCCATTTTCAAGCAAATCCCAGGGTTTTTGGAGGAATTAAAGGCAAAATTGGAAAAAGATGTTGAAACTGCGAGAGAGAGATTTGAGAATGGCGATTTCGCAGTGGAAAATAGAATCAGGAAATGCAGCACGTACCCGATCTACCACTTTGTGAGGACTGAAGTGGGAACTCATCTGCTCAGTGGCGCGAAGAAGGTGAGCCCTGGTGAAGATATTGAGAAAGTGGTGGAAGCCATTAATGAAGGGAAGCTTGGAGATGTTGTGATCATGTGTTTGAAGAATTAG 2136 47.28 MANCESFCSSPLFETDSVPQSKSFSSVSASDHWVKAANALSHPHFEEVCRMVSEFQEAQTVDIEGTTLTVAQVTAIARRSDVKVNLNDTVARDRVAKSANWVAEKISRGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGKDNLPSSYSKAAMLVRTNTLMQGYSGIRWEILEAVVKLMNENLIPKLPLRGTITASGDLVPLSYIAGVITGRHNSKVTTMEGDEITAMEALKRAGIAGPFELQAKEGLALVNGTAVGSAVAATVCYDANLLALLAVVLSALFCEAMLGKPEFADPLTHKLKHHPGQIESAAAMEFLLDQSDFMKEAKIRHENDPLTKPKQDRYALRTSPQWLGPQIEVIRMATQSIEREINSVNDNPLIDVNRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLIFAQFSELVCDHYNNGLPSNLSAGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQYEENMREVVKNSLLQTIRRTLYVAEYGSLLESRFCEKDLLQVIEREAVFSYIDDPTNTSYPLFPKLLEVLVGRALKGVGTVKSENGNETGIAIFKQIPGFLEELKAKLEKDVETARERFENGDFAVENRIRKCSTYPIYHFVRTEVGTHLLSGAKKVSPGEDIEKVVEAINEGKLGDVVIMCLKN 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63385246 63387381 + Tan0001329.1 Tan09g1108 763451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1108 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Tan09g1108 711 PANTHER HISTIDINE AMMONIA-LYASE 27 711 IPR001106 GO:0016841(PANTHER)
Tan09g1108 711 NCBIfam phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Tan09g1108 711 CDD PAL-HAL 66 525 IPR001106 -
Tan09g1108 711 Pfam Aromatic amino acid lyase 68 535 IPR001106 -
Tan09g1108 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841(InterPro)
Tan09g1108 711 Gene3D - 528 654 IPR023144 -
Tan09g1108 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824(InterPro)
Tan09g1108 711 Gene3D - 21 261 IPR024083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1108 Tan-Chr9:63385246 Tan10g1452 Tan-Chr10:19872823 8.50E-237 dispersed
Tan09g1108 Tan-Chr9:63385246 Tan03g1079 Tan-Chr3:67008633 1.10E-241 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1108 K10775 - csv:101205510 1216.83