Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1114 ATGAGGAAGGGAGGATTCAGCAACAACCTCAATCTCAAGCTCAATCTCCCTCAAGAAGACCAATCCATAGCCAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTAAACAGAGATGGGGTTCGGATTGTTTCTCAGAGCGAAGTTGAAGCTCCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCAGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGGACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAGGAATCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCACAGTGTCCCTATATTGTTGTCTGTTACCAATCGTTCTATGATAATGGCTCAATATATATCATTTTAGAGTACATGGATGGTGGATCTTTAGCTGATTTTTTGAAAAAGGTTAAAAAAATTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGATGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCTTCTAATTTATTAGTAAACCATAGAGGGGAAGTCAAGATTACTGACTTTGGTGTCAGTGCGATTATGGCAAGCACATCTGGAGAGGCTAATACTTTCGTTGGCACGTACAACTATATGTCTCCCGAGAGAATTGTTGGAGAAAGATATGACAATAAAAGTGACATTTGGAGCTTGGGGCTGATAGTACTTGAGTGTGCAACCGGCAAATTCCCTTATTCTCCTCCAGAGCAAGATGGAGGATGGGTTAATTTTTATGAGCTTATGGAAGCCATTGTTGAGGGCGAACCTCCTTCTGCTCCAGCTGACCAATTTACTCCCAACTTCTGTTCGTTCATTTCTGCATGTTTGCAAAACGACCCAAAGGATAGACCGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAGGATACGGATATTGACCTGTCATCTTACTTCAATGATGCAGGATCTCCACTTGCAACTTTCTAA 1068 41.67 MRKGGFSNNLNLKLNLPQEDQSIAKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIQEPYLAALCKQVLKGLMYLHHERHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERIVGERYDNKSDIWSLGLIVLECATGKFPYSPPEQDGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISACLQNDPKDRPSARELLEHPFIKMYEDTDIDLSSYFNDAGSPLATF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63452776 63457478 + Tan0021319.1 Tan09g1114 763457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1114 355 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Tan09g1114 355 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524(InterPro)
Tan09g1114 355 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
Tan09g1114 355 FunFam Mitogen-activated protein kinase kinase 6 152 350 - -
Tan09g1114 355 SMART serkin_6 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1114 355 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 17 351 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Tan09g1114 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1114 355 SUPERFAMILY Protein kinase-like (PK-like) 55 337 IPR011009 -
Tan09g1114 355 FunFam Mitogen-activated protein kinase kinase 6 41 150 - -
Tan09g1114 355 CDD PKc_MAPKK_plant_like 69 335 - -
Tan09g1114 355 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1114 355 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2167 Tan-Chr5:72452973 Tan09g1114 Tan-Chr9:63452776 1.70E-59 dispersed
Tan08g0445 Tan-Chr8:4250686 Tan09g1114 Tan-Chr9:63452776 2.00E-29 dispersed
Tan09g1114 Tan-Chr9:63452776 Tan11g1341 Tan-Chr11:11645114 8.80E-33 dispersed
Tan07g1394 Tan-Chr7:64829880 Tan09g1114 Tan-Chr9:63452776 9.70E-65 transposed
Tan08g0109 Tan-Chr8:951011 Tan09g1114 Tan-Chr9:63452776 1.60E-127 transposed
Tan08g0048 Tan-Chr8:531752 Tan09g1114 Tan-Chr9:63452776 3.60E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68038 PF00069 Pkinase 7.40E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1114 K20603 - csv:101204545 685.641