Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1116 ATGGAGAATCATCAGGAGGTTGAAGGCGAGGAAGAAGATGGAGTGGGACACACCGCCGTGGAAGAGGAAGAAATTGGAGTTGTGGGTTCGAGCTTGACTCTGGAGAAGGTCGCTGCGGCCAAACAGTACATCGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGATCCGTGCTAGAAAGGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATCAACCTATTGAAGGATTTAGAGCGCAAGGAGACTCAATACATGCGGCTGAAAAGACATAAAATTTGTGTTGAAGATTTCGACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGAAACATATATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCAAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTGATCATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCTAGATTTTATGTCGCCCAAAGTGTTCTGGCTATAGAGTCGATTCATATCCATAACTACATCCACAGAGACATAAAACCTGATAACCTTCTGCTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGTACAAATCTGTCTTCTATAAATGAAAACGAAATCCTTGATGATGATAATTTGAACGACACGGTGGATGTGGATGAGAGCATTCCAGGTAAAAAAAGTGGGAGGCGCTGGAAGAGTCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTTGGCACTCCAGATTACATAGCTCCAGAAGTGTTGCTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTACGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGACTTGATCGGTAGGCTGCTTTGTGATGCTGAGCATAGGCTCGGTACTGGAGGCGCAGACCAAATAAAGGCTCATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTATGAAATAGATGCAGCATTTAAGCCCGAGGTCAATGGGGAGCTCGATACACAGAATTTTATGCAATTTGATGAGGTCGATCCACCGCCAACTAGAACTGGATCTGGACCAATAAGGAAGATGTTGCTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCTGTCAAAGGGCTACACCATTCATTTGATTTGAAGTCAAGCACCACCCCGATTCGGACCTCGTCTGCTGACTCTACACAAAGTGACTCGGCATTGAACTACTCTACTACCTACTCGACTGATGACAGGGAGGTCATATTGGCATCATCAGGGGATGCTTTGTCACAGTAA 1611 43.27 MENHQEVEGEEEDGVGHTAVEEEEIGVVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSVLERKLASSDVSEEEQINLLKDLERKETQYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHIHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSSINENEILDDDNLNDTVDVDESIPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDLIGRLLCDAEHRLGTGGADQIKAHPWFKDTEWDKLYEIDAAFKPEVNGELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLHHSFDLKSSTTPIRTSSADSTQSDSALNYSTTYSTDDREVILASSGDALSQ 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63472031 63482127 - Tan0013220.1 Tan09g1116 763459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1116 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 FunFam Non-specific serine/threonine protein kinase 67 189 - -
Tan09g1116 536 FunFam Non-specific serine/threonine protein kinase 312 431 - -
Tan09g1116 536 Pfam Protein kinase domain 108 255 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 Pfam Protein kinase domain 306 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 Pfam Protein kinase C terminal domain 432 476 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 FunFam Non-specific serine/threonine protein kinase 432 442 - -
Tan09g1116 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 414 486 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 MobiDBLite consensus disorder prediction 495 515 - -
Tan09g1116 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 482 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan09g1116 536 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524(InterPro)
Tan09g1116 536 CDD MobB_NDR_LATS-like 40 101 - -
Tan09g1116 536 SUPERFAMILY Protein kinase-like (PK-like) 89 462 IPR011009 -
Tan09g1116 536 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Tan09g1116 536 SMART serkin_6 106 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 CDD STKc_NDR_like 104 477 - -
Tan09g1116 536 ProSiteProfiles Protein kinase domain profile. 106 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1116 536 MobiDBLite consensus disorder prediction 1 22 - -
Tan09g1116 536 FunFam Non-specific serine/threonine protein kinase 190 257 - -
Tan09g1116 536 Gene3D Transferase(Phosphotransferase) domain 1 192 430 - -
Tan09g1116 536 SMART pkinase_C_6 414 478 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4600 Tan-Chr1:112003969 Tan09g1116 Tan-Chr9:63472031 9.90E-227 dispersed
Tan01g4601 Tan-Chr1:112003969 Tan09g1116 Tan-Chr9:63472031 9.90E-227 dispersed
Tan09g1116 Tan-Chr9:63472031 Tan09g1118 Tan-Chr9:63474173 5.10E-234 dispersed
Tan09g1116 Tan-Chr9:63472031 Tan09g1117 Tan-Chr9:63474173 5.40E-260 tandem
Tan06g2405 Tan-Chr6:76338891 Tan09g1116 Tan-Chr9:63472031 5.30E-186 transposed
Tan01g4598 Tan-Chr1:112003969 Tan09g1116 Tan-Chr9:63472031 9.90E-227 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68039 PF00069 Pkinase 3.30E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1116 K08790 - csv:101208238 962.6