Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1117 ATGGAGAATCATCAGGAGGTTGAAGGCGAGGAAGAAGATGGAGTGGGACACACCGCCGTGGAAGAGGAAGAAATTGGAGTTGTGGGTTCGAGCTTGACTCTGGAGAAGGTCGCTGCGGCCAAACAGTACATCGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGATCCGTGCTAGAAAGGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATCAACCTATTGAAGGATTTAGAGCGCAAGGAGACTCAATACATGCGGCTGAAAAGACATAAAATTTGTGTTGAAGATTTCGACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGAAACATATATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCAAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTGATCATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCTAGATTTTATGTCGCCCAAAGTGTTCTGGCTATAGAGTCGATTCATATCCATAACTACATCCACAGAGACATAAAACCTGATAACCTTCTGCTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGTACAAATCTGTCTTCTATAAATGAAAACGAAATCCTTGATGATGATAATTTGAACGACACGGTGGATGTGGATGAGAGCATTCCAGGTAAAAAAAGTGGGAGGCGCTGGAAGAGTCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTTGGCACTCCAGATTACATAGCTCCAGAAGTGTTGCTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTACGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGACTTGATCGGTAGGCTGCTTTGTGATGCTGAGCATAGGCTCGGTACTGGAGGCGCAGACCAAATAAAGGCTCATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTATGAAATAGATGCAGCATTTAAGCCCGAGGTCAATGGGGAGCTCGATACACAGAATTTTATGCAATTTGATGAGGTGAGGTCTTATAGATAG 1356 42.85 MENHQEVEGEEEDGVGHTAVEEEEIGVVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSVLERKLASSDVSEEEQINLLKDLERKETQYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHIHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSSINENEILDDDNLNDTVDVDESIPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDLIGRLLCDAEHRLGTGGADQIKAHPWFKDTEWDKLYEIDAAFKPEVNGELDTQNFMQFDEVRSYR 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63474173 63482127 - Tan0013220.2 Tan09g1117 763460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1117 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 Gene3D Phosphorylase Kinase; domain 1 65 189 - -
Tan09g1117 451 Gene3D Transferase(Phosphotransferase) domain 1 312 431 - -
Tan09g1117 451 FunFam Non-specific serine/threonine protein kinase 312 431 - -
Tan09g1117 451 SUPERFAMILY Protein kinase-like (PK-like) 88 425 IPR011009 -
Tan09g1117 451 FunFam Non-specific serine/threonine protein kinase 190 257 - -
Tan09g1117 451 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524(InterPro)
Tan09g1117 451 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 443 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan09g1117 451 CDD MobB_NDR_LATS-like 40 101 - -
Tan09g1117 451 ProSiteProfiles AGC-kinase C-terminal domain profile. 414 451 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 Gene3D Transferase(Phosphotransferase) domain 1 190 257 - -
Tan09g1117 451 Pfam Protein kinase domain 108 255 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 Pfam Protein kinase domain 306 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 Gene3D Phosphorylase Kinase; domain 1 432 442 - -
Tan09g1117 451 SMART serkin_6 106 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 FunFam Non-specific serine/threonine protein kinase 432 442 - -
Tan09g1117 451 CDD STKc_NDR_like 104 447 - -
Tan09g1117 451 ProSiteProfiles Protein kinase domain profile. 106 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1117 451 MobiDBLite consensus disorder prediction 1 22 - -
Tan09g1117 451 FunFam Non-specific serine/threonine protein kinase 67 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2405 Tan-Chr6:76338891 Tan09g1117 Tan-Chr9:63474173 2.50E-175 dispersed
Tan09g1117 Tan-Chr9:63474173 Tan09g2184 Tan-Chr9:71899468 2.00E-53 dispersed
Tan09g1116 Tan-Chr9:63472031 Tan09g1117 Tan-Chr9:63474173 5.40E-260 tandem
Tan09g1117 Tan-Chr9:63474173 Tan09g1118 Tan-Chr9:63474173 4.30E-234 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68040 PF00069 Pkinase 2.40E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1117 K08790 - csv:101208238 827.78