Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1158 ATGAGCAGAGTGATGAAGTCGCGGATGCTGGCAGCTTCAACAACAGCGTTGCTGAGAAGCAGATCATTTCAGTTCCATGATGTCTTCAATTTAGATAATGAGAATCGAGCAGAAGACATGCCTACATTAATTGATCGAAAGGACAATGTCTTTATTATATCCAATCCCAAGTCAAAGTATCCAGTACTCCAATTGGATTTAAGACTGATTTCGGATCTAGTCGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTTGCTTGTGCTGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGGGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTAATCTTCCTTCTTTTTGCATTGGGCTTGGAGTTCTCCACTACAAAACTTCGTGTTGTTCGAGCAGTGGCTGTTCTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGCTTATGTGGAATTACAGCTTCACTATGTGGCGGTAAATCTTCAGAGGGGGTATTCGTTGGTGCATTCCTATCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAGCGAAATAGCGTCAATGCCCTTCATGGTCAGGTGACCGTTGGTACTCTTATTCTTCAGGATTGTGCAGTAGGCTTGCTGTTTGCCCTGCTTCCAATTCTTGGCGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTAGTGGTCTTGATTACGTTTTTGATTTTTTTGACAATATTATCTCGCACATGTGTGCCGTGGTTCCTGAAGCTTATGATTAGCCTGTCATCTCAGACTAATGAGCTCTATCAATTGGCAGCTGTTGCATTCTGCTTACTTGTAGCTTGGTGCAGTGATAAACTTGGCTTAAGCCTTGAATTGGGTTCCTTTGCTGCGGGTGTGATGATATCAACTACTGATCTTGCTCAGCACACACTTGAACAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGAATGCTTATTCATGTTCATTTCCTATGGAACCATATTGATATTTTACTTGCGGCTGTAATATTGGTCATCATTATAAAAACTATAGTGGTTGCTACCGTTGTCAAGGGATTTGGATACACCAACAAGACTTCACTTCTGGTTGGGATGTCACTCGCACAGATTGGGGAATTTGCTTTCGTCCTTCTAAGTCGTGCCTCTAATCTTCATCTTGTCGAGGTTGGTGCTTGA 1272 42.92 MSRVMKSRMLAASTTALLRSRSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTVGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLIFLTILSRTCVPWFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTIVVATVVKGFGYTNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEVGA 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63907897 63919299 + Tan0014793.4 Tan09g1158 763501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1158 423 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 420 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan09g1158 423 Gene3D - 67 422 IPR038770 -
Tan09g1158 423 Pfam Sodium/hydrogen exchanger family 77 419 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1156 Tan-Chr9:63907897 Tan09g1158 Tan-Chr9:63907897 4.10E-222 dispersed
Tan09g1158 Tan-Chr9:63907897 Tan10g0265 Tan-Chr10:2327004 1.20E-31 dispersed
Tan09g1157 Tan-Chr9:63907897 Tan09g1158 Tan-Chr9:63907897 3.70E-213 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1158 K26735 - csv:101208614 709.909