Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1161 ATGGAGAAGGGTCATCTTGATGTGGCTGGGAAAGTGGTGGTCGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGCTGCTCTGGTTTGGGCTTTGACTCACGTTGTTCAGCCTGGAGATCATATTAAGCTCCTTGTGGTTATCCCGTCTCATCACTCAAGTAAATGGATGCGGGGATTTTCCCGATTTACCAGCGACTGTGCGATTGGTCATCTGAGAACTTCATCAGGAACCCTTTCAGATCAGAAGGATGACATTGTGCATTCATGTTCTCAAATGGTACATCAGCTTCATGGTGCTTATGACCCACTAAAGATAAAAGTGAGGATCAAAGTTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCAAACTGGGTGGTATTGGACAAACATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTCTGAATTTAATGGAATCCCCTAAAATAAATACTAGAGAAGCTTGGATATCTTCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTATTTCGATGAATCGGCCATGTTTAGGGCTCCTGATGTGACTCCTATCAGTACTCCTGATGTAGAGTCTCCTCTTACCGTAACTGATGTTGGAACATCGTCAATATCGAGCTCGGATGTGGGCAGTTCATCTTTGTTCTCTGGGTTTTGTGGCAGCCTGAGAAATGAATCCAGAACAGCAGCTGAAGGAGGGAGAAATTTGTCTGGATCCGAATGTGATTCTGAGAGTGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATATTGTAAGTTCCAGGCGTAAATTCCATCAACACACAATGGAAGAATCACAAAATGCTCATCATAGACCTCCAGCTTCAACACGTCAAGGTCTGGTCAAGAAAACGTCGACTTTTTCTCTTGAACCTAGCACTGATGTGGGGAATCGAAATACCGATATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCTTTATCCAGAAAAGCACCTCTAGGTCCTCCTCCACTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATACAGAGCTTGAAGTTGCAACAAGTGGATTTGCACAAACAAATTTTTTGGCGGAGGGTGGATATGGGTCTGTGCACCGAGGCGTCTTACCAGATGGACAAGTCGTTGCTGTCAAGCAATATAAACTGGCCAGCACCCAGGGAGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGAAACGTTGTGATGCTCATTGGATTTTGTGTGGAGGGCGGAAGAAGGTTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGAAATCGTGATCCACTGAAATGGTCCGCACGACAAAAGATTGCAGTTGGAGCTGCTCGAGGTTTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGCCCGAACAATATCCTCCTTACTCATGATTTCGAACCACTAGTCGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGCGACCTAGCAGTAGAAACCAGAATCCTTGGGCGTTTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCCGATACATACTCATTTGGCGTAGTCTTGCTGGAACTTGTGACTGGACGCAAAGCAATCGATTTAAATCGTCCCAAGGGCCAGCAGTGCCTCACTGAATGGGATGGGTATATTGGTCCATTCTGTACTGTGGGAGCCTTTGCAAAGCTGGGAAATGGTTGTCAATTATATCCTGGGAGCCACATTTTTGGTTGTACAGAACTGGGAAATCGATGTGTCTTGATGACTGGCGCAATAGTTGGTGAGGACCTTCCTGGTCGTACAGTCATTGGGTGTAATAACAAAATAGGTCACCATGCTGTGGTTGGCATTAGATGCCAAGACATGAAATACAAGCCAGGAGAAGAATGCTTCCTTGATATTGGAGATAACAATGACATAAGAGAACATTCATCAATCCACCGATCTTCGAAGTCAAGTGATGTGACGGCTATTGGTGATAACAATCTCATAATGGGATCCTGTCATATTGCTCATGATTGCAAGATTGGTAACAACAATATTTTTGCAAATAATACTCTTCTAGCCGGCCATGTTGTGGTGGAGGACTATGTTCACACAGCAGGTGCCACTGCAGTTCATCAATTCTGCCATGTTGGTTCTTTCTCATTTGTTGCTGCGGGTTCGTTGGTTTCACAAGATGTCCCCAAATACATGATGGTGGCGGGAGAAAGACCAGAACTGCGTGGTTTGAATCTAGAGGGACTTCGGCGCAATGGATTCACCGTGGAAGAGATCAATGGCTTAAGATCTGCTTACAGGAAGGTATTCATGCCTACTGATTCAAATTCTAAAGGGTTGGAAGAACGTCTTATGGAAGTGGAACAGCATGAAAAATTGGCTCGTATACCTTCAGTGCATTCCATGATTCAGTCAATTCGTGCCTCCTTTGAACAGAATCGTCGGGGAATATGCAAGTTCAGGCTATGGAGTGGCTCTTAG 2670 44.53 MEKGHLDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHHSSKWMRGFSRFTSDCAIGHLRTSSGTLSDQKDDIVHSCSQMVHQLHGAYDPLKIKVRIKVLSGLARGMVATEAKKAQSNWVVLDKHLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTREAWISSHELDVSQKCLKSYFDESAMFRAPDVTPISTPDVESPLTVTDVGTSSISSSDVGSSSLFSGFCGSLRNESRTAAEGGRNLSGSECDSESEKQTPSVSYFQRCMVDIVSSRRKFHQHTMEESQNAHHRPPASTRQGLVKKTSTFSLEPSTDVGNRNTDISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYTELEVATSGFAQTNFLAEGGYGSVHRGVLPDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWDGYIGPFCTVGAFAKLGNGCQLYPGSHIFGCTELGNRCVLMTGAIVGEDLPGRTVIGCNNKIGHHAVVGIRCQDMKYKPGEECFLDIGDNNDIREHSSIHRSSKSSDVTAIGDNNLIMGSCHIAHDCKIGNNNIFANNTLLAGHVVVEDYVHTAGATAVHQFCHVGSFSFVAAGSLVSQDVPKYMMVAGERPELRGLNLEGLRRNGFTVEEINGLRSAYRKVFMPTDSNSKGLEERLMEVEQHEKLARIPSVHSMIQSIRASFEQNRRGICKFRLWSGS 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63935962 63951757 - Tan0020017.2 Tan09g1161 763504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1161 889 SMART tyrkin_6 395 632 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Tan09g1161 889 Gene3D HUPs 11 164 IPR014729 -
Tan09g1161 889 SUPERFAMILY Protein kinase-like (PK-like) 376 607 IPR011009 -
Tan09g1161 889 Pfam Bacterial transferase hexapeptide (six repeats) 721 752 IPR001451 -
Tan09g1161 889 Pfam Protein tyrosine and serine/threonine kinase 399 594 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1161 889 Gene3D Transferase(Phosphotransferase) domain 1 471 609 - -
Tan09g1161 889 PANTHER ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE 613 888 IPR010137 GO:0008610(InterPro)|GO:0008780(InterPro)
Tan09g1161 889 MobiDBLite consensus disorder prediction 297 343 - -
Tan09g1161 889 MobiDBLite consensus disorder prediction 254 276 - -
Tan09g1161 889 Pfam Udp N-acetylglucosamine O-acyltransferase; Domain 2 790 881 IPR029098 -
Tan09g1161 889 ProSiteProfiles Protein kinase domain profile. 395 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1161 889 MobiDBLite consensus disorder prediction 308 343 - -
Tan09g1161 889 Gene3D - 808 889 IPR037157 -
Tan09g1161 889 SUPERFAMILY Trimeric LpxA-like enzymes 613 850 IPR011004 -
Tan09g1161 889 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1161 889 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Tan09g1161 889 Gene3D Hexapeptide repeat proteins 610 807 - -
Tan09g1161 889 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1161 Tan-Chr9:63935962 Tan08g0167 Tan-Chr8:1415873 4.50E-70 dispersed
Tan09g1160 Tan-Chr9:63935962 Tan09g1161 Tan-Chr9:63935962 0.00E+00 tandem
Tan09g1161 Tan-Chr9:63935962 Tan09g1162 Tan-Chr9:63947351 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68044 PF07714 PK_Tyr_Ser-Thr 1.50E-38 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1161 - - - 0.0