Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1162 ATGGAGAAGGGTCATCTTGATGTGGCTGGGAAAGTGGTGGTCGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGCTGCTCTGGTTTGGGCTTTGACTCACGTTGTTCAGCCTGGAGATCATATTAAGCTCCTTGTGGTTATCCCGTCTCATCACTCAAGTAAATGGATGCGGGGATTTTCCCGATTTACCAGCGACTGTGCGATTGGTCATCTGAGAACTTCATCAGGAACCCTTTCAGATCAGAAGGATGACATTGTGCATTCATGTTCTCAAATGGTACATCAGCTTCATGGTGCTTATGACCCACTAAAGATAAAAGTGAGGATCAAAGTTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCAAACTGGGTGGTATTGGACAAACATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTCTGAATTTAATGGAATCCCCTAAAATAAATACTAGAGAAGCTTGGATATCTTCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTATTTCGATGAATCGGCCATGTTTAGGGCTCCTGATGTGACTCCTATCAGTACTCCTGATGTAGAGTCTCCTCTTACCGTAACTGATGTTGGAACATCGTCAATATCGAGCTCGGATGTGGGCAGTTCATCTTTGTTCTCTGGGTTTTGTGGCAGCCTGAGAAATGAATCCAGAACAGCAGCTGAAGGAGGGAGAAATTTGTCTGGATCCGAATGTGATTCTGAGAGTGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATATTGTAAGTTCCAGGCGTAAATTCCATCAACACACAATGGAAGAATCACAAAATGCTCATCATAGACCTCCAGCTTCAACACGTCAAGGTCTGGTCAAGAAAACGTCGACTTTTTCTCTTGAACCTAGCACTGATGTGGGGAATCGAAATACCGATATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCTTTATCCAGAAAAGCACCTCTAGGTCCTCCTCCACTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATACAGAGCTTGAAGTTGCAACAAGTGGATTTGCACAAACAAATTTTTTGGCGGAGGGTGGATATGGGTCTGTGCACCGAGGCGTCTTACCAGATGGACAAGTCGTTGCTGTCAAGCAATATAAACTGGCCAGCACCCAGGGAGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGAAACGTTGTGATGCTCATTGGATTTTGTGTGGAGGGCGGAAGAAGGTTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGAAATCGTGATCCACTGAAATGGTCCGCACGACAAAAGATTGCAGTTGGAGCTGCTCGAGGTTTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGCCCGAACAATATCCTCCTTACTCATGATTTCGAACCACTAGTCGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGCGACCTAGCAGTAGAAACCAGAATCCTTGGGCGTTTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCCGATACATACTCATTTGGCGTAGTCTTGCTGGAACTTGTGACTGGACGCAAAGCAATCGATTTAAATCGTCCCAAGGGCCAGCAGTGCCTCACTGAATGGGCACGAAACCTGTTGCGAAAAAATGCAATCTCTGAACTGGTCGATCCATGCTTGATGAACTGTTATTCGGACGAGGAAGTTCATCGCATGCTGCAATGCGCTTCCTTGTGCATCAAGCACGATCCATATGTAAGACCGCGTATGTCTCAGGTGCTTCGGGTCTTGGAGGGCGACATCGTTTTATAA 2016 45.14 MEKGHLDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHHSSKWMRGFSRFTSDCAIGHLRTSSGTLSDQKDDIVHSCSQMVHQLHGAYDPLKIKVRIKVLSGLARGMVATEAKKAQSNWVVLDKHLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTREAWISSHELDVSQKCLKSYFDESAMFRAPDVTPISTPDVESPLTVTDVGTSSISSSDVGSSSLFSGFCGSLRNESRTAAEGGRNLSGSECDSESEKQTPSVSYFQRCMVDIVSSRRKFHQHTMEESQNAHHRPPASTRQGLVKKTSTFSLEPSTDVGNRNTDISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYTELEVATSGFAQTNFLAEGGYGSVHRGVLPDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKNAISELVDPCLMNCYSDEEVHRMLQCASLCIKHDPYVRPRMSQVLRVLEGDIVL 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 63947351 63952234 - Tan0020017.3 Tan09g1162 763505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1162 671 Pfam Protein tyrosine and serine/threonine kinase 399 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1162 671 SMART tyrkin_6 395 665 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Tan09g1162 671 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1162 671 MobiDBLite consensus disorder prediction 297 343 - -
Tan09g1162 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Tan09g1162 671 CDD STKc_IRAK 401 667 - -
Tan09g1162 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 471 671 - -
Tan09g1162 671 MobiDBLite consensus disorder prediction 254 276 - -
Tan09g1162 671 PANTHER OS01G0750732 PROTEIN 198 666 IPR050885 -
Tan09g1162 671 MobiDBLite consensus disorder prediction 308 343 - -
Tan09g1162 671 SUPERFAMILY Protein kinase-like (PK-like) 376 665 IPR011009 -
Tan09g1162 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1162 671 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Tan09g1162 671 Gene3D HUPs 11 164 IPR014729 -
Tan09g1162 671 Gene3D Transferase(Phosphotransferase) domain 1 471 669 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2747 Tan-Chr4:86910117 Tan09g1162 Tan-Chr9:63947351 1.80E-229 dispersed
Tan09g1160 Tan-Chr9:63935962 Tan09g1162 Tan-Chr9:63947351 0.00E+00 dispersed
Tan09g1162 Tan-Chr9:63947351 Tan09g1285 Tan-Chr9:65032981 1.10E-81 dispersed
Tan09g1161 Tan-Chr9:63935962 Tan09g1162 Tan-Chr9:63947351 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68045 PF07714 PK_Tyr_Ser-Thr 1.10E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1162 - - - 0.0