Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1205 ATGGGGAGAGCGACGAGATGGCTGAAGAATTTGTTTGGGATTAAGAAAGAAAAAGAAACCGCCAGAGAAAATTCCAACTCCGGCGTCAAAAAGGATAAAAAACACACTTCTAATTTCGCCGGCGACGCTGAACTCTGCAACAATCCAGCCACAATACCGCCGAATTTATCGGCGGCGGAGGCGGCTTGGCTGAAATCATTCTACTCGGAAACAGAGAAGGAACAGAGCAAGCACGCAATAGCAGTGGCTGCAGCCACCGCCGCCGCGGCTGACGCGGCGGTTGCTGCAGCACAAGCCGCGGTGGCGGTGGTCCGGCTGACCAGCCACGGTAGAGGCACCATGTTCGGGGGCGGCCGGGAAAGATGGGCCTCTGTCAAGATTCAAACTTGCTTCAGAGGGTTTCTGGCGAGAAAAGCACTTAGAGCGCTGAAAGGATTGGTGAAATTACAGGCGCTTGTGAGAGGGTATTTAATTCGTAAACAAGCAACAGCAACTCTTCACAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCGTTCGATCTCAGAGAACTCGCAGATTCGTAAACGACGAAATAGTTAATAAAAACAGACTTGAAATCCGAGCCCGAAAATCCACGGAGAGATTTGACGACACGAAAAGCGAACACACAGCTTCAGTACATAGCAGAAGGCTTTCAGCTTCATTAGACAACACAGCATTTACAGCACTTGAAGAAAGCCCCAAAATCGTGGAAATGGACACCGGCCGACCGAAATCCTGGTCTCGCCGGACGAACACGTCGGCGTCGGAATTGGGCGACGACCCATTTCACCAAACGCTGTCGTCTCCACTCCCCTGCCGGACTCCGTCGCGTTTGCAGATCCCAGATTGCCGGAATTTCCACGAGTCCGACTGGGGTCTCACCGGCGACGAGTGCCGTTTGATCTCGACGGCGCAGAGCACTCCACGATTTGTTAGTTCCGGGGGATCCAACGGCCCTCCGACGCCGGCGAAGAGCATGTGCGCCGACAATTTCTTCAGAGGGTACTTGAATTTCCCGAATTACATGGCGAATACTCAATCGTTTAAGGCGAAATTGAGGTCTCACAGTGCTCCGAAACAGAGGCCGGAGCCGGGATCGAAGAAGAGGCTTTCGTTGAACGAATTGATGGAATCGAGAAGCAGCCTTAGTGGGGTTCGAATGCAGAGATCTTGTTCGCATGTTCAAGAAGCCATTAATTTCAAGAATGCTGTGATGAGCAAACTGGATAGGCCATCGGAATTCAACAACTTGCAGAGAAAATTTTGA 1290 51.47 MGRATRWLKNLFGIKKEKETARENSNSGVKKDKKHTSNFAGDAELCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGFLARKALRALKGLVKLQALVRGYLIRKQATATLHSMQALIRAQATVRSQRTRRFVNDEIVNKNRLEIRARKSTERFDDTKSEHTASVHSRRLSASLDNTAFTALEESPKIVEMDTGRPKSWSRRTNTSASELGDDPFHQTLSSPLPCRTPSRLQIPDCRNFHESDWGLTGDECRLISTAQSTPRFVSSGGSNGPPTPAKSMCADNFFRGYLNFPNYMANTQSFKAKLRSHSAPKQRPEPGSKKRLSLNELMESRSSLSGVRMQRSCSHVQEAINFKNAVMSKLDRPSEFNNLQRKF 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64343511 64345157 - Tan0010299.1 Tan09g1205 763548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1205 429 Gene3D - 118 168 - -
Tan09g1205 429 MobiDBLite consensus disorder prediction 246 278 - -
Tan09g1205 429 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515(InterPro)
Tan09g1205 429 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515(InterPro)
Tan09g1205 429 ProSiteProfiles IQ motif profile. 144 171 - -
Tan09g1205 429 SMART iq_5 142 163 IPR000048 GO:0005515(InterPro)
Tan09g1205 429 SMART iq_5 119 141 IPR000048 GO:0005515(InterPro)
Tan09g1205 429 Pfam Protein of unknown function (DUF4005) 320 391 IPR025064 -
Tan09g1205 429 MobiDBLite consensus disorder prediction 253 278 - -
Tan09g1205 429 PANTHER IQ-DOMAIN 5-RELATED 6 396 - -
Tan09g1205 429 ProSiteProfiles IQ motif profile. 120 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0233 Tan-Chr6:1916509 Tan09g1205 Tan-Chr9:64343511 4.00E-93 dispersed
Tan07g1698 Tan-Chr7:68309334 Tan09g1205 Tan-Chr9:64343511 5.90E-17 dispersed
Tan09g1205 Tan-Chr9:64343511 Tan10g0796 Tan-Chr10:6628723 7.90E-28 dispersed
Tan03g0725 Tan-Chr3:62926435 Tan09g1205 Tan-Chr9:64343511 1.70E-22 transposed
Tan04g2691 Tan-Chr4:86410449 Tan09g1205 Tan-Chr9:64343511 5.70E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1205 - - - 0.0