Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1209 ATGACGAAATCTCTTTCTTCTCTTCTCTTTTTTCTGGAAACCATTTCCTTCTTCCTCCTCTGTACCCACCATGCCAATTCCCAACTCTACCAACAGGAACACTCTGTTCTCCTCCGATTAAACCAGTTCTGGCAAAATCAAGCCCCAATCACCCATTGGCAGTCTTCAAATGCTTCTCATTGTACATGGCCGGAGATTCAGTGCACTAACAACTCTGTCACTGCTCTGTTTTTCTTTAACTACAATTTGAACGGAACCTTCCCCCCTTTCCTTTGCGATCTCAAGAATCTCACCCACCTTGATCTTGAGCTCAATTTCATCACCGGTCGCTTTCCTACCACTCTTTACAATTGTTCCAAGCTTAACTACCTCATTCTCGCTCAGAATTACTTCGTCGGCCCGATTCCCGATGACGTTGACCGCTTGTCTCGCCTCCAGTTTCTTAGTCTCGGCGGCAACAGTTTCTCCGGCGAAATTCCGGTATCCATTTCTCGGTTATCGGAACTCCGGTCCCTTTACCTTTTTGTGAATAAATTCAATGGGACTATCCCATCTGAGATCGGTAACTTGTCGAATCTAGAAGAATTGCTGATGGCTTATAATTCAAATCTGCTACCGGCAGAATTGCCCTCCAGTTTCGCCCAATTGAAGAAGTTGACGTATATATGGATGGCAGGTTCGAACCTAGTTGGTGAAATTCCTGATTGGATCGGAAATTTGACCGCCCTCGAGAGATTGGATTTATCTACCAACAAGTTGATTGGGAAAATCCCTAGCAGTTTGTTTACGTTGAAGAATCTTAGTGCCGTTTATCTGTTCAAGAACAGTCTGTCGGGAGAAATTCCGACTCAGATTGATTCTAAAAACATCACTGAATACGACCTATCGGAAAATAACTTGACCGGAGAAATTCCGGCGGCTATCGGCGATCTTCAGCAATTAAGGGCTCTGCTTCTGTTTTCAAATCGCTTACATGGAGAAATCCCAGAGAGCATCGGCCGTCTTCCCTTATTAACAGACGTCAGATTGTTCGACAACAGTTTAACCGGCACACTGCCGCCAGATTTCGGCCGGAATTTGATTCTCAAAACAATTGAGGTGAACAATAATAAGCTCACCGGAAGCTTACCGAAGCACTTGTGCTCCGGCAGTAAGCTCGTAGGAGTCACTGCTTTCGAGAATAATCTTAGTGGGGAACTGCCAGAGTCGCTTGGGAATTGCGATAGCTTAATGATGATTGATGTTCATAAGAACAACTTTTCTGGGAAAATTCCGGCCGGTCTATGGACGTCTCTGAATTTAACTTTTGTAGTGCTGAGCGACAATTCTTTCACGGGTGAACTCCCTGAGAGAATATCAAAGAATCTTGCGAGATTGGATATCAGTAACAATAAATTTTCGGGGAAAATTCCATCTGGGTTATCTTCATCGTGGAATTTGACCGAGTTTGAAGCAAGCAATAATATGTTGACAGGACAAATTCCTGAAGAACTCACTTCTCTTTCAAAGTTGAACAAGCTTTGGCTTGACGGAAATCAACTCATCGGAGAGCTTCCACAGAATATCATTTCATGGAGATCATTGAACAATCTTAACATCGGTCGAAATCGTCTTTCCGGTGAAATTCCCGACGAACTTGGTGGTTTACCAAGCCTCACTGATCTTGATCTCTCGGAGAATCGACTTTCTGGGACGATTCCGACTCAACTAGGATCTTTGAAGCTGAATTTCCTTAACCTTTCTTCGAATTTTCTATCTGGGACAATCCCACTTGCATTTGAAAACTCAATCTATGCAAAAAGCTTTTTGAACAATCCGAATCTTTGTTCAAACAACGCAGTTCTAAAATTGGATAGCTGCAGCTTGAGAACTCAGAATTCGAGAAAGATTTCATCGCAGCATCTTGCTCTGATCGTCAGCTTGGGCATCATACTATTCATACTCTTTGTACTTTCTGCTGTATGCATAATCAAAATCTACAGGAAGAATGGACACAGAGCAGATGTTGAATGGAAACTGACCTCATTTCAGAGGCTGAATTTCTCGGAGACAAATCTTTTGTCTGGGCTATCGGAAAATAACGTGATCGGAAGCGGTGGATCCGGGAAAGTTTACCGGATCCCAGTGAATAATTTAGGTGATACAGTGGCCGTGAAGAGGATATGGAACAACAGAAAGTCAGATCACAAGCTGGAGAAAGAATTCATGGCGGAAGTGAAGATTCTCAGTTCAATTCGACACAACAACATTATCAAACTCCTCTGCTGCGTTTCCTGTGAAACTTCACGGCTTCTAGTTTACGAGTACATGGAGAAGCAAAGCCTGGACAAATGGCTGCACAAGAGGAACACTCCGCCGAGGATTACAGGGTCGGACCCTGTTTGCGGTGTCGCCCTTGATTGGCCGACAAGATTTCAAATTGCAGTAGGGGCGGCCCAAGGCCTCTGTTATATGCACCATGAATGCTCACCTCCGGTAATTCACAGAGACTTGAAGTCCAGCAATATCTTATTGGATTCAGAATTCAATGCCAAAATAGCAGATTTTGGCTTAGCCAAGTTGCTGGTAAAACAGGGAGAACCGGCTTCAGTCTCCGCCGTGGCAGGTTCTTTCGGATACATAGCTCCAGAGTATGCTCAGACGCCAAGAATTAACGAGAAGATCGACGTGTTTAGCTATGGGGTTATTCTTCTCGAGTTGGTGACTGGAAAGGATGCCCTCAACGGCGATGAAGACTCGTCTCTGGCCGAGTGGGCTTGGGAGTACATTCAACAAGGCAAGCAAATAACCGATGCATTGGATGAGGATGTGAAAGAGCCACATTATCTTGATGAAATGTGCAGTGTTTTCAAACTCGGAGTGATCTGCACTTCCAGTTTGCCAACCAGCCGGCCGACCATGAACCAGGCTCTGGAAATCTTGATCCGCAGCCGGACCTCGACACCCGAAAACCATGGAGTCAAAAAACTCTGA 2973 44.64 MTKSLSSLLFFLETISFFLLCTHHANSQLYQQEHSVLLRLNQFWQNQAPITHWQSSNASHCTWPEIQCTNNSVTALFFFNYNLNGTFPPFLCDLKNLTHLDLELNFITGRFPTTLYNCSKLNYLILAQNYFVGPIPDDVDRLSRLQFLSLGGNSFSGEIPVSISRLSELRSLYLFVNKFNGTIPSEIGNLSNLEELLMAYNSNLLPAELPSSFAQLKKLTYIWMAGSNLVGEIPDWIGNLTALERLDLSTNKLIGKIPSSLFTLKNLSAVYLFKNSLSGEIPTQIDSKNITEYDLSENNLTGEIPAAIGDLQQLRALLLFSNRLHGEIPESIGRLPLLTDVRLFDNSLTGTLPPDFGRNLILKTIEVNNNKLTGSLPKHLCSGSKLVGVTAFENNLSGELPESLGNCDSLMMIDVHKNNFSGKIPAGLWTSLNLTFVVLSDNSFTGELPERISKNLARLDISNNKFSGKIPSGLSSSWNLTEFEASNNMLTGQIPEELTSLSKLNKLWLDGNQLIGELPQNIISWRSLNNLNIGRNRLSGEIPDELGGLPSLTDLDLSENRLSGTIPTQLGSLKLNFLNLSSNFLSGTIPLAFENSIYAKSFLNNPNLCSNNAVLKLDSCSLRTQNSRKISSQHLALIVSLGIILFILFVLSAVCIIKIYRKNGHRADVEWKLTSFQRLNFSETNLLSGLSENNVIGSGGSGKVYRIPVNNLGDTVAVKRIWNNRKSDHKLEKEFMAEVKILSSIRHNNIIKLLCCVSCETSRLLVYEYMEKQSLDKWLHKRNTPPRITGSDPVCGVALDWPTRFQIAVGAAQGLCYMHHECSPPVIHRDLKSSNILLDSEFNAKIADFGLAKLLVKQGEPASVSAVAGSFGYIAPEYAQTPRINEKIDVFSYGVILLELVTGKDALNGDEDSSLAEWAWEYIQQGKQITDALDEDVKEPHYLDEMCSVFKLGVICTSSLPTSRPTMNQALEILIRSRTSTPENHGVKKL 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64412203 64415264 - Tan0005102.1 Tan09g1209 763552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1209 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1209 990 Gene3D Ribonuclease Inhibitor 528 612 IPR032675 -
Tan09g1209 990 Gene3D Ribonuclease Inhibitor 456 527 IPR032675 -
Tan09g1209 990 FunFam Receptor-like protein kinase HSL1 670 769 - -
Tan09g1209 990 SMART LRR_typ_2 549 573 IPR003591 -
Tan09g1209 990 SMART LRR_typ_2 501 525 IPR003591 -
Tan09g1209 990 SMART LRR_typ_2 94 118 IPR003591 -
Tan09g1209 990 SMART LRR_typ_2 142 166 IPR003591 -
Tan09g1209 990 SMART LRR_typ_2 240 264 IPR003591 -
Tan09g1209 990 SMART LRR_typ_2 311 335 IPR003591 -
Tan09g1209 990 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524(InterPro)
Tan09g1209 990 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 286 380 - -
Tan09g1209 990 Gene3D Ribonuclease Inhibitor 288 455 IPR032675 -
Tan09g1209 990 Gene3D Transferase(Phosphotransferase) domain 1 770 988 - -
Tan09g1209 990 FunFam Leucine-rich receptor-like protein kinase family protein 381 622 - -
Tan09g1209 990 Pfam Protein kinase domain 692 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1209 990 Gene3D Ribonuclease Inhibitor 182 287 IPR032675 -
Tan09g1209 990 Pfam Leucine Rich Repeat 527 549 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 479 501 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 455 476 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 169 190 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 574 595 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 Pfam Leucine Rich Repeat 551 573 IPR001611 GO:0005515(InterPro)
Tan09g1209 990 SUPERFAMILY L domain-like 49 382 - -
Tan09g1209 990 SMART serkin_6 690 979 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1209 990 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 186 285 - -
Tan09g1209 990 Gene3D Ribonuclease Inhibitor 32 181 IPR032675 -
Tan09g1209 990 Gene3D Phosphorylase Kinase; domain 1 672 769 - -
Tan09g1209 990 SUPERFAMILY Protein kinase-like (PK-like) 683 974 IPR011009 -
Tan09g1209 990 SUPERFAMILY RNI-like 257 613 - -
Tan09g1209 990 FunFam Receptor-like protein kinase HSL1 isoform A 30 181 - -
Tan09g1209 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 974 IPR050647 -
Tan09g1209 990 FunFam Kinase family with leucine-rich repeat domain-containing protein 770 989 - -
Tan09g1209 990 ProSiteProfiles Protein kinase domain profile. 690 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2541 Tan-Chr2:93939053 Tan09g1209 Tan-Chr9:64412203 5.10E-129 dispersed
Tan09g1209 Tan-Chr9:64412203 Tan11g1064 Tan-Chr11:8334444 6.00E-63 dispersed
Tan09g1209 Tan-Chr9:64412203 Tan03g2516 Tan-Chr3:78512855 6.00E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68048 PF00069 Pkinase 3.80E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1209 - - - 0.0