Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1239 ATGGGTTGCGTTTATTCGAGGGTTTGCATTGGCGAGGCTACAACTCCAAGATCTTCGAGAATAGCCGAAACCCAAACTGCCAAAACCGCCGCTGAAATCGACTCGATCTCTTCTTCGTCTTCCGATAGCCAAAAAGGGGAAATCGGCGACCAACTGAATCAACTGAATTCAGACAACAGAGATTCAGAAGTCGGAATCACGAGGCTCTCGAGAGTTTCGTCCCAGTTCTTGCCCGCCGATGGGTCTCGAACCGTCAAAGTTCCTTCCGGAAACTTCGAATTGCGATATTCGTTCCTTTCGCAAAGAGGGTATTATCCCGATGCCCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGACCATTTCTTTGGTGTTTTCGATGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTTAAACGAAAGCTCTGTGAAAATTTACTTAGGAACAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCCCAATTACACGCAGATATCTTGGATGATAGCATGAGTGGTACTACTGCTACTACAGTTTTAGTTAGAGGTACGACTATATATGTTTCTAATTCAGGTGATTCGAGAGCGGTTCTAGCAGAGAGGAGAGGAAAGGAAGTTGTGGCTGTCGACCTCTCTATCGATCAAACTCCATTCCGAACCGATGAACTCGAACGGGTTAAGCTTTGTGGTGCCAGAGTCCTTACACTTGATCAGATTGAGGGACTGAAGAACCCTGATGTTCAGTGCTGGGGTACTGAAGAAGGAGATGATGGCGATCCTCCTAGGCTCTGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGATTCAATTGCTGAGACTATTGGAGTTGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACCGGATCATCCTTTCTTTGTTGTGGCTAGTGATGGTGTTTTTGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTTCTAAATATAAAGATCCCCGTGATGCTTGTGCTGCGATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTGTTATCGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCCACAAGATCCAGTGGAGGTGATTTTGTTCGATCCACTGTCCCTCAAGTCGTGGAGGTGACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAATAGAAACAATCGTGCAAGACAAGATTTGTCAAGGGCACGTCTCCGGGCTATTGAAAGTTCCCTAGAGAATGGGCAAGTCTGGGTGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGACCATTTCCTCTTCAGAAAGCTAACTGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTTGAGGTCATACCAGGGCAAATTGTAGTCGAACAAGGTGGTGAAGGCGACTGTTTTTATGTGGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTACACAGCTGAGAAGCTATCTTCCTTTGGTGAACTGGCTTTGATGTATAACAAACCACTTCAAGCCTCAGTACGTGCTGTGACGAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTTCTGTCAAAGTTAACAATCTTGCAACTGAGTCACATTGCAGAGTGCCTTTCTGAAGTTGCCTTCTCAGATGGGCAGCGGATAGTTGATGGGACGGAAGGCTTATCTGCACTGCACATTATTCATAAGGGACAAGTGAGGATGACTTTTGACGGGGAGTTAATGAGCAATTCAAATGTTTACGGCTACAATTATGCCAGTCAAAATGAGGACAATGCTGCACGGAGTGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGCGAATGGGCACTTCTTGGTGAGCATATCGGCTTCTTACGCGCGGTTGCTGTAGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCTTTACCAAAACTCTCTCAAGATGATCAAAAGGCGAAGGAACATTCTTCAGACTCTCTCCATCACTCTGCCAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTCGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACGGAATACAGTGAGATCGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGGAGCACAAGTTTCCAAGGAGAAAAATCTAATGAAAAACATCAGTCCTTCAGCTTGTGTGCCGCAACTTCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAACACATGTCTTGCTTGTCCTTTCTCTTCGATACTTCACGTCCCACTCGATGAATCTTCTGCACGTTTCTACGCAGCATCCCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCTGATGTTCTAATGTTGGATCAAACCGGACGCGTACAGTTAGTAGACTTCAGATTTGGGAAAAGAACGTCAGGTGGGAGAACGTATACTATTTGCGGGATGGCAGACTTTTTAGCGCCTGAGATAGTTCAGGGCAATGGTCATGGTTTTGCTGCTGACTGGTGGGCACTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAATGCCATTCGGGTCGTGGCGACAAAGTGAGCTCGATGTTTTTTCGAAGATTGCTAAAGGACAATTAAGTCTTCCCGAGATTTTCAGTCCTGAAGCCATTGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAAAGACTCGGAAACGAGAACCAAAACTCTGTTAGAAGTCATCCATGGTTTGATGGTGTTGATTGGAAGGGGATCCGCGACGGTACCTTTCCCGTTACCGACACAATCACTTCTCGTGTGGCTCAATATTTGGCGAGCTACCTTGAAGATTCAAGTGATTCTTTAGTTAAACCACCTCAAGATCCTGAAGAGCAGGATGCTCCCGAGTGGATCAGCGACTGGTAG 3249 45.18 MGCVYSRVCIGEATTPRSSRIAETQTAKTAAEIDSISSSSSDSQKGEIGDQLNQLNSDNRDSEVGITRLSRVSSQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTATTVLVRGTTIYVSNSGDSRAVLAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDHPFFVVASDGVFEFLSSQTVVDMVSKYKDPRDACAAIVAESYRLWLQFETRTDDITVIVVHINGLTNTVTSESTRSSGGDFVRSTVPQVVEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIAECLSEVAFSDGQRIVDGTEGLSALHIIHKGQVRMTFDGELMSNSNVYGYNYASQNEDNAARSGKEISVIKKEGSYFGEWALLGEHIGFLRAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKAKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLGAQVSKEKNLMKNISPSACVPQLLCTCLDQSHAGILLNTCLACPFSSILHVPLDESSARFYAASLVIALEDLHKLGVLYRGISPDVLMLDQTGRVQLVDFRFGKRTSGGRTYTICGMADFLAPEIVQGNGHGFAADWWALGVLIYFMLKGEMPFGSWRQSELDVFSKIAKGQLSLPEIFSPEAIDLIVKLLEVDEKKRLGNENQNSVRSHPWFDGVDWKGIRDGTFPVTDTITSRVAQYLASYLEDSSDSLVKPPQDPEEQDAPEWISDW 1082
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64759072 64765787 - Tan0008125.1 Tan09g1239 763582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1239 1082 Pfam Protein kinase domain 782 1025 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1239 1082 CDD CAP_ED 606 738 IPR000595 -
Tan09g1239 1082 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
Tan09g1239 1082 Gene3D Phosphorylase Kinase; domain 1 770 855 - -
Tan09g1239 1082 Gene3D Jelly Rolls 593 750 IPR014710 -
Tan09g1239 1082 Gene3D Transferase(Phosphotransferase) domain 1 856 1036 - -
Tan09g1239 1082 CDD CAP_ED 480 588 IPR000595 -
Tan09g1239 1082 SUPERFAMILY PP2C-like 83 387 IPR036457 -
Tan09g1239 1082 PRINTS cAMP-dependent protein kinase signature 516 530 - -
Tan09g1239 1082 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Tan09g1239 1082 PRINTS cAMP-dependent protein kinase signature 501 515 - -
Tan09g1239 1082 PRINTS cAMP-dependent protein kinase signature 551 560 - -
Tan09g1239 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 606 732 IPR000595 -
Tan09g1239 1082 Gene3D Jelly Rolls 449 588 IPR014710 -
Tan09g1239 1082 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Tan09g1239 1082 MobiDBLite consensus disorder prediction 32 59 - -
Tan09g1239 1082 SMART serkin_6 778 1025 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1239 1082 SMART cnmp_10 606 745 IPR000595 -
Tan09g1239 1082 SMART cnmp_10 480 603 IPR000595 -
Tan09g1239 1082 MobiDBLite consensus disorder prediction 1058 1082 - -
Tan09g1239 1082 SUPERFAMILY Protein kinase-like (PK-like) 764 1046 IPR011009 -
Tan09g1239 1082 CDD PP2Cc 111 385 IPR001932 -
Tan09g1239 1082 SUPERFAMILY cAMP-binding domain-like 597 737 IPR018490 -
Tan09g1239 1082 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169(InterPro)
Tan09g1239 1082 SUPERFAMILY cAMP-binding domain-like 460 589 IPR018490 -
Tan09g1239 1082 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 352 1081 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Tan09g1239 1082 SMART PP2C_4 91 383 IPR001932 -
Tan09g1239 1082 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 90 387 - -
Tan09g1239 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 480 588 IPR000595 -
Tan09g1239 1082 Gene3D - 89 386 IPR036457 -
Tan09g1239 1082 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 454 594 - -
Tan09g1239 1082 Pfam Protein phosphatase 2C 123 363 IPR001932 -
Tan09g1239 1082 ProSiteProfiles Protein kinase domain profile. 771 1025 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2592 Tan-Chr6:78582916 Tan09g1239 Tan-Chr9:64759072 1.80E-118 dispersed
Tan09g0622 Tan-Chr9:52973373 Tan09g1239 Tan-Chr9:64759072 1.10E-24 dispersed
Tan09g1239 Tan-Chr9:64759072 Tan09g1241 Tan-Chr9:64759072 0.00E+00 dispersed
Tan09g1239 Tan-Chr9:64759072 Tan09g1240 Tan-Chr9:64759072 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68049 PF00069 Pkinase 3.40E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1239 - - - 0.0