Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1242 ATGGGTTGCGTTTATTCGAGGGTTTGCATTGGCGAGGCTACAACTCCAAGATCTTCGAGAATAGCCGAAACCCAAACTGCCAAAACCGCCGCTGAAATCGACTCGATCTCTTCTTCGTCTTCCGATAGCCAAAAAGGGGAAATCGGCGACCAACTGAATCAACTGAATTCAGACAACAGAGATTCAGAAGTCGGAATCACGAGGCTCTCGAGAGTTTCGTCCCAGTTCTTGCCCGCCGATGGGTCTCGAACCGTCAAAGTTCCTTCCGGAAACTTCGAATTGCGATATTCGTTCCTTTCGCAAAGAGGGTATTATCCCGATGCCCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGACCATTTCTTTGGTGTTTTCGATGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTTAAACGAAAGCTCTGTGAAAATTTACTTAGGAACAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCCCAATTACACGCAGATATCTTGGATGATAGCATGAGTGGTACTACTGCTACTACAGTTTTAGTTAGAGGTACGACTATATATGTTTCTAATTCAGGTGATTCGAGAGCGGTTCTAGCAGAGAGGAGAGGAAAGGAAGTTGTGGCTGTCGACCTCTCTATCGATCAAACTCCATTCCGAACCGATGAACTCGAACGGGTTAAGCTTTGTGGTGCCAGAGTCCTTACACTTGATCAGATTGAGGGACTGAAGAACCCTGATGTTCAGTGCTGGGGTACTGAAGAAGGAGATGATGGCGATCCTCCTAGGCTCTGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGATTCAATTGCTGAGACTATTGGAGTTGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACCGGATCATCCTTTCTTTGTTGTGGCTAGTGATGGTGTTTTTGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTTCTAAATATAAAGATCCCCGTGATGCTTGTGCTGCGATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTGTTATCGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCCACAAGATCCAGTGGAGGTGATTTTGTTCGATCCACTGTCCCTCAAGTCGTGGAGGTGACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAATAGAAACAATCGTGCAAGACAAGATTTGTCAAGGGCACGTCTCCGGGCTATTGAAAGTTCCCTAGAGAATGGGCAAGTCTGGGTGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGACCATTTCCTCTTCAGAAAGCTAACTGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTTGAGGTCATACCAGGGCAAATTGTAGTCGAACAAGGTGGTGAAGGCGACTGTTTTTATGTGGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTACACAGCTGAGAAGCTATCTTCCTTTGGTGAACTGGCTTTGATGTATAACAAACCACTTCAAGCCTCAGTACGTGCTGTGACGAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTTCTGTCAAAGTTAACAATCTTGCAACTGAGTCACATTGCAGAGTGCCTTTCTGAAGTTGCCTTCTCAGATGGGCAGCGGATAGTTGATGGGACGGAAGGCTTATCTGCACTGCACATTATTCATAAGGGACAAGTGAGGATGACTTTTGACGGGGAGTTAATGAGCAATTCAAATGTTTACGGCTACAATTATGCCAGTCAAAATGAGGACAATGCTGCACGGAGTGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGCGAATGGGCACTTCTTGGTGAGCATATCGGCTTCTTACGCGCGGTTGCTGTAGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCTTTACCAAAACTCTCTCAAGATGATCAAAAGGCGAAGGAACATTCTTCAGACTCTCTCCATCACTCTGCCAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTCGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACGGAATACAGTGAGATCGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGGAGCACAAGTTTCCAAGGAGAAAAATCTAATGAAAAACATCAGTCCTTCAGCTTGTGTGCCGCAACTTCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAACACATGTCTTGCTTGTCCTTTCTCTTCGATACTTCACGTCCCACTCGATGAATCTTCTGCACGTTTCTACGCAGCATCCCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCTGATGTTCTAATGTTGGATCAAACCGGACGCGTACAGTTAGTAGACTTCAGATTTGGGAAAAGAACGTCAGGTGGGAGAACGTATACTATTTGCGGGATGGCAGACTTTTTAGCGCCTGAGATAGTTCAGGGCAATGGTCATGGTTTTGCTGCTGACTGGTGGGCACTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAATGCCATTCGGGTCGTGGCGACAAAGTGAGCTCGATGTTTTTTCGAAGATTGCTAAAGGACAATTAAGTCTTCCCGAGATTTTCAGTCCTGAAGCCATTGATCTCATCGTCAAGGTAGTGCTTAATAATCAACAATCTCCTCTACCCTTTCCCAGTCCCAACTGCAATCACCGAGCTTTTACTTTGCTAAGCCAATCATATATTGTAATTTTTTCCTTGTCTAATGTATGA 3120 44.81 MGCVYSRVCIGEATTPRSSRIAETQTAKTAAEIDSISSSSSDSQKGEIGDQLNQLNSDNRDSEVGITRLSRVSSQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTATTVLVRGTTIYVSNSGDSRAVLAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDHPFFVVASDGVFEFLSSQTVVDMVSKYKDPRDACAAIVAESYRLWLQFETRTDDITVIVVHINGLTNTVTSESTRSSGGDFVRSTVPQVVEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIAECLSEVAFSDGQRIVDGTEGLSALHIIHKGQVRMTFDGELMSNSNVYGYNYASQNEDNAARSGKEISVIKKEGSYFGEWALLGEHIGFLRAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKAKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLGAQVSKEKNLMKNISPSACVPQLLCTCLDQSHAGILLNTCLACPFSSILHVPLDESSARFYAASLVIALEDLHKLGVLYRGISPDVLMLDQTGRVQLVDFRFGKRTSGGRTYTICGMADFLAPEIVQGNGHGFAADWWALGVLIYFMLKGEMPFGSWRQSELDVFSKIAKGQLSLPEIFSPEAIDLIVKVVLNNQQSPLPFPSPNCNHRAFTLLSQSYIVIFSLSNV 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64759072 64765787 - Tan0008125.4 Tan09g1242 763585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1242 1039 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
Tan09g1242 1039 Gene3D Transferase(Phosphotransferase) domain 1 856 1008 - -
Tan09g1242 1039 Pfam Protein phosphatase 2C 123 363 IPR001932 -
Tan09g1242 1039 CDD CAP_ED 606 738 IPR000595 -
Tan09g1242 1039 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 352 1001 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Tan09g1242 1039 SUPERFAMILY Protein kinase-like (PK-like) 764 1004 IPR011009 -
Tan09g1242 1039 Gene3D Phosphorylase Kinase; domain 1 770 855 - -
Tan09g1242 1039 SMART serkin_6 778 1023 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1242 1039 CDD CAP_ED 480 588 IPR000595 -
Tan09g1242 1039 Gene3D Jelly Rolls 449 588 IPR014710 -
Tan09g1242 1039 Gene3D Jelly Rolls 593 750 IPR014710 -
Tan09g1242 1039 ProSiteProfiles cAMP/cGMP binding motif profile. 606 732 IPR000595 -
Tan09g1242 1039 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Tan09g1242 1039 MobiDBLite consensus disorder prediction 32 59 - -
Tan09g1242 1039 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 90 387 - -
Tan09g1242 1039 SUPERFAMILY cAMP-binding domain-like 597 737 IPR018490 -
Tan09g1242 1039 SMART cnmp_10 606 745 IPR000595 -
Tan09g1242 1039 SMART cnmp_10 480 603 IPR000595 -
Tan09g1242 1039 SUPERFAMILY PP2C-like 83 387 IPR036457 -
Tan09g1242 1039 SUPERFAMILY cAMP-binding domain-like 460 589 IPR018490 -
Tan09g1242 1039 PRINTS cAMP-dependent protein kinase signature 516 530 - -
Tan09g1242 1039 PRINTS cAMP-dependent protein kinase signature 551 560 - -
Tan09g1242 1039 PRINTS cAMP-dependent protein kinase signature 501 515 - -
Tan09g1242 1039 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Tan09g1242 1039 CDD PP2Cc 111 385 IPR001932 -
Tan09g1242 1039 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169(InterPro)
Tan09g1242 1039 SMART PP2C_4 91 383 IPR001932 -
Tan09g1242 1039 Pfam Protein kinase domain 782 1007 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1242 1039 ProSiteProfiles cAMP/cGMP binding motif profile. 480 588 IPR000595 -
Tan09g1242 1039 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 454 594 - -
Tan09g1242 1039 Gene3D - 89 386 IPR036457 -
Tan09g1242 1039 ProSiteProfiles Protein kinase domain profile. 771 1023 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1240 Tan-Chr9:64759072 Tan09g1242 Tan-Chr9:64759072 0.00E+00 dispersed
Tan09g1242 Tan-Chr9:64759072 Tan02g0526 Tan-Chr2:4728862 3.30E-19 dispersed
Tan09g1241 Tan-Chr9:64759072 Tan09g1242 Tan-Chr9:64759072 0.00E+00 tandem
Tan09g1242 Tan-Chr9:64759072 Tan09g1243 Tan-Chr9:64759072 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68052 PF00481 PP2C 1.10E-33 CL0238 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1242 - - - 0.0