Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1243 ATGGGTTGCGTTTATTCGAGGGTTTGCATTGGCGAGGCTACAACTCCAAGATCTTCGAGAATAGCCGAAACCCAAACTGCCAAAACCGCCGCTGAAATCGACTCGATCTCTTCTTCGTCTTCCGATAGCCAAAAAGGGGAAATCGGCGACCAACTGAATCAACTGAATTCAGACAACAGAGATTCAGAAGTCGGAATCACGAGGCTCTCGAGAGTTTCGTCCCAGTTCTTGCCCGCCGATGGGTCTCGAACCGTCAAAGTTCCTTCCGGAAACTTCGAATTGCGATATTCGTTCCTTTCGCAAAGAGGGTATTATCCCGATGCCCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGACCATTTCTTTGGTGTTTTCGATGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTTAAACGAAAGCTCTGTGAAAATTTACTTAGGAACAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCCCAATTACACGCAGATATCTTGGATGATAGCATGAGTGGTACTACTGCTACTACAGTTTTAGTTAGAGGTACGACTATATATGTTTCTAATTCAGGTGATTCGAGAGCGGTTCTAGCAGAGAGGAGAGGAAAGGAAGTTGTGGCTGTCGACCTCTCTATCGATCAAACTCCATTCCGAACCGATGAACTCGAACGGGTTAAGCTTTGTGGTGCCAGAGTCCTTACACTTGATCAGATTGAGGGACTGAAGAACCCTGATGTTCAGTGCTGGGGTACTGAAGAAGGAGATGATGGCGATCCTCCTAGGCTCTGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGATTCAATTGCTGAGACTATTGGAGTTGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACCGGATCATCCTTTCTTTGTTGTGGCTAGTGATGGTGTTTTTGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTTCTAAATATAAAGATCCCCGTGATGCTTGTGCTGCGATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTGTTATCGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCCACAAGATCCAGTGGAGGTGATTTTGTTCGATCCACTGTCCCTCAAGTCGTGGAGGTGACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAATAGAAACAATCGTGCAAGACAAGATTTGTCAAGGGCACGTCTCCGGGCTATTGAAAGTTCCCTAGAGAATGGGCAAGTCTGGGTGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGACCATTTCCTCTTCAGAAAGCTAACTGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTTGAGGTCATACCAGGGCAAATTGTAGTCGAACAAGGTGGTGAAGGCGACTGTTTTTATGTGGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTACACAGCTGAGAAGCTATCTTCCTTTGGTGAACTGGCTTTGATGTATAACAAACCACTTCAAGCCTCAGTACGTGCTGTGACGAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTTCTGTCAAAGTTAACAATCTTGCAACTGAGTCACATTGCAGAGTGCCTTTCTGAAGTTGCCTTCTCAGATGGGCAGCGGATAGTTGATGGGACGGAAGGCTTATCTGCACTGCACATTATTCATAAGGGACAAGTGAGGATGACTTTTGACGGGGAGTTAATGAGCAATTCAAATGTTTACGGCTACAATTATGCCAGTCAAAATGAGGACAATGCTGCACGGAGTGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGCGAATGGGCACTTCTTGGTGAGCATATCGGCTTCTTACGCGCGGTTGCTGTAGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCTTTACCAAAACTCTCTCAAGATGATCAAAAGGCGAAGGAACATTCTTCAGACTCTCTCCATCACTCTGCCAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTCGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACGGAATACAGTGAGATCGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGGAGCACAAGTTTCCAAGGAGAAAAATCTAATGAAAAACATCAGTCCTTCAGCTTGTGTGCCGCAACTTCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAACACATGTCTTGCTTGTCCTTTCTCTTCGATACTTCACGTCCCACTCGATGAATCTTCTGCACGTTTCTACGCAGCATCCCTTGTTATAGCACTGGAAGATTTGCACAAGGTTTGA 2664 45.01 MGCVYSRVCIGEATTPRSSRIAETQTAKTAAEIDSISSSSSDSQKGEIGDQLNQLNSDNRDSEVGITRLSRVSSQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTATTVLVRGTTIYVSNSGDSRAVLAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDHPFFVVASDGVFEFLSSQTVVDMVSKYKDPRDACAAIVAESYRLWLQFETRTDDITVIVVHINGLTNTVTSESTRSSGGDFVRSTVPQVVEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIAECLSEVAFSDGQRIVDGTEGLSALHIIHKGQVRMTFDGELMSNSNVYGYNYASQNEDNAARSGKEISVIKKEGSYFGEWALLGEHIGFLRAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKAKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLGAQVSKEKNLMKNISPSACVPQLLCTCLDQSHAGILLNTCLACPFSSILHVPLDESSARFYAASLVIALEDLHKV 887
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64759072 64765787 - Tan0008125.5 Tan09g1243 763586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1243 887 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 352 886 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Tan09g1243 887 CDD CAP_ED 606 738 IPR000595 -
Tan09g1243 887 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 454 594 - -
Tan09g1243 887 Gene3D Transferase(Phosphotransferase) domain 1 856 886 - -
Tan09g1243 887 Gene3D Jelly Rolls 593 750 IPR014710 -
Tan09g1243 887 CDD CAP_ED 480 588 IPR000595 -
Tan09g1243 887 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 90 387 - -
Tan09g1243 887 SUPERFAMILY Protein kinase-like (PK-like) 770 886 IPR011009 -
Tan09g1243 887 SUPERFAMILY cAMP-binding domain-like 460 589 IPR018490 -
Tan09g1243 887 ProSiteProfiles cAMP/cGMP binding motif profile. 606 732 IPR000595 -
Tan09g1243 887 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Tan09g1243 887 MobiDBLite consensus disorder prediction 32 59 - -
Tan09g1243 887 Gene3D - 89 386 IPR036457 -
Tan09g1243 887 SMART cnmp_10 606 745 IPR000595 -
Tan09g1243 887 SMART cnmp_10 480 603 IPR000595 -
Tan09g1243 887 Pfam Protein phosphatase 2C 123 363 IPR001932 -
Tan09g1243 887 Gene3D Jelly Rolls 449 588 IPR014710 -
Tan09g1243 887 Gene3D Phosphorylase Kinase; domain 1 770 855 - -
Tan09g1243 887 CDD PP2Cc 111 385 IPR001932 -
Tan09g1243 887 SUPERFAMILY cAMP-binding domain-like 597 737 IPR018490 -
Tan09g1243 887 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169(InterPro)
Tan09g1243 887 PRINTS cAMP-dependent protein kinase signature 516 530 - -
Tan09g1243 887 PRINTS cAMP-dependent protein kinase signature 501 515 - -
Tan09g1243 887 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Tan09g1243 887 PRINTS cAMP-dependent protein kinase signature 551 560 - -
Tan09g1243 887 SMART PP2C_4 91 383 IPR001932 -
Tan09g1243 887 ProSiteProfiles cAMP/cGMP binding motif profile. 480 588 IPR000595 -
Tan09g1243 887 SUPERFAMILY PP2C-like 83 387 IPR036457 -
Tan09g1243 887 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1241 Tan-Chr9:64759072 Tan09g1243 Tan-Chr9:64759072 0.00E+00 dispersed
Tan09g1243 Tan-Chr9:64759072 Tan01g0325 Tan-Chr1:2867221 2.40E-10 dispersed
Tan09g1242 Tan-Chr9:64759072 Tan09g1243 Tan-Chr9:64759072 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1243 - - - 0.0