Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1264 ATGGGGGAAGTAGAGAATCGAGAGATGGATAATTTGCCCCCGCCAAATGCTCAAACGGATACTGCGGAACCGGGTAACGTGGTTTCATCTGATGTTCCTGCTAAGAAACTAGCTAGGCAGCTGGATTTTACGGGGTTTGGTGGTGCAGTCTTGCCAGAGCACCCTCATTTTCAGGCTCAGTCACCCGCCGTGATGGTAGCGCAGAATCAGTCGCAGCAAAAATCCCCACAACATTTGATGGTTTTGCCCATTGGAACACAATCGCCTCATCCTGTGAGAAAGCCAGATTCTCCGAAGTCAAGATCAAGGTCTGTTGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAACTGCAAACACTCACGCTGCTTAAAGCTGTACTGTGAGTGCTTTGCATCTGGAATATACTGCGATGGTTGCAATTGTGCAAATTGCTATAACAATGTTGAGAATGAAGCTTCTAGGAGAGAAGCAGTCGAAACCACTTTAGAACGGAATCCAAATGCATTCCGACCAAAAATTGCTAGCAGCCCACATGGAACACGAGAGAGCAGGGATGAGATTGGAGAGGTCGTAATGCTGGTAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGTTGCTTAAAGAAGTATTGTGAGTGCTTTCAGGCCAATATTCTCTGCTCTGAAAACTGTAAGTGCATGGACTGTAAGAATTTTGAAGGAAGTGAAGAGAGACAAGCACTTTTCCATGGTGACCATGTCAACAACATGGCTTATCTTCAGCAGGCAGCCAATGCTGCAATAACGGGAGCTATTGGATCCTCCGGTTATGCTTGCCTTCCCACTTCAAAGAAAAGAAAAGGTCCAGAGCTATGTTTTGGCACTACAGGGAAGGATCCCCCCCTCAACAGCATATCACAATTTCATCAGGCTAATAATATATTGTCTTCTGGTGCGTCTGCATCATCTCCCCTCCCTGTTGCTCATCTTGGCAGCCCTGCAGCCCCGGGGCCTTCAAAGTTTTCATTCAGATCCCTATTGGCAGACCTCATCCAGCCGAACGACTTCAAGGAGCTTTGCTCAGTTTTAGTGGTGTTATCAAGTGAAGCTGCCAAGAAATTAGCAGAACAAAGAATTTCTGAGAAGCAGATGAATGATCCACCACAGAATTCCCGAGCTTCGTCAACTGGAGATAGGTCACAGCATCAGAAGGCAGACGAGAAAGCTGCAGATGGCGAGCGTGGAAGTTTAAACCAAGGTGATAGAATTGTACATGATAATTCCAATTCAGATAGTTCGGATACGACAAGAGCAAGGCCAATGTCCCCTGGAACTTTAGCTTTAATGTGTGACGAAAGAGATACAATGTTCATGGGAGCTGCTCCAGCCGATGGGTTGGCAGGCCATGGTTGCAACACATCATCACACGTGCCTGATAAATCTGTGTCAGAAGTCTACATAGAGCAGGAGCGGATTGTTTTGACAAAGTTTCGAGATTGTCTTAATAAACTCGTCACTCTTGGAGAGATAAAAGAAACAAAATTCACTAGAAGCGAAGTGAGGAATGAAAGTCACAGCAACAATTTCACCTCAAATAGTGGTTGCCAACAGAGAACTATTAGCAATGGGGTCGTAAAAAATGTCGCTCTCTCGGCACCCAGAATACCATCGCCAATCGGTACTGCAGCTCGTCATCCTAGCAATGATCTGCTACCCAAAATCCTACCCCTTCCTGAAAATGGGAAGAGTAAACCAGAAATTGGCAGAGAAGTATAG 1767 45.5 MGEVENREMDNLPPPNAQTDTAEPGNVVSSDVPAKKLARQLDFTGFGGAVLPEHPHFQAQSPAVMVAQNQSQQKSPQHLMVLPIGTQSPHPVRKPDSPKSRSRSVETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEASRREAVETTLERNPNAFRPKIASSPHGTRESRDEIGEVVMLVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHVNNMAYLQQAANAAITGAIGSSGYACLPTSKKRKGPELCFGTTGKDPPLNSISQFHQANNILSSGASASSPLPVAHLGSPAAPGPSKFSFRSLLADLIQPNDFKELCSVLVVLSSEAAKKLAEQRISEKQMNDPPQNSRASSTGDRSQHQKADEKAADGERGSLNQGDRIVHDNSNSDSSDTTRARPMSPGTLALMCDERDTMFMGAAPADGLAGHGCNTSSHVPDKSVSEVYIEQERIVLTKFRDCLNKLVTLGEIKETKFTRSEVRNESHSNNFTSNSGCQQRTISNGVVKNVALSAPRIPSPIGTAARHPSNDLLPKILPLPENGKSKPEIGREV 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 64953195 64960372 + Tan0009189.1 Tan09g1264 763607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1264 588 MobiDBLite consensus disorder prediction 1 33 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 396 417 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 374 441 - -
Tan09g1264 588 ProSiteProfiles CRC domain profile. 114 238 IPR005172 -
Tan09g1264 588 MobiDBLite consensus disorder prediction 94 113 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 555 588 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 379 395 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 83 113 - -
Tan09g1264 588 SMART CXC_2 113 153 IPR033467 -
Tan09g1264 588 SMART CXC_2 198 239 IPR033467 -
Tan09g1264 588 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 115 150 IPR005172 -
Tan09g1264 588 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 201 235 IPR005172 -
Tan09g1264 588 PANTHER TESMIN/TSO1-RELATED 52 511 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Tan09g1264 588 MobiDBLite consensus disorder prediction 12 26 - -
Tan09g1264 588 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2609 Tan-Chr4:85297328 Tan09g1264 Tan-Chr9:64953195 1.10E-09 transposed
Tan06g2503 Tan-Chr6:77698852 Tan09g1264 Tan-Chr9:64953195 1.80E-32 transposed
Tan10g0801 Tan-Chr10:6724208 Tan09g1264 Tan-Chr9:64953195 2.20E-31 transposed
Tan08g0159 Tan-Chr8:1354511 Tan09g1264 Tan-Chr9:64953195 5.10E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28343 PF03638 TCR 3.10E-12 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1264 - - - 0.0