Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1285 ATGTCGTCTCCGGCTCCGACCTCGCCGCCGGCGACTAACACGACCTCACCCCCACCTCCGACCACCGTCGCACCACCCCCGGCGCCTCCATCTCTCTCACCGCCGCCTCCTGATACTCCCTCCGAGCCTCCGCCTGCTTCCTCGCCGCCGCCCTCCACCACTCCTTCGCCGCCGCCTCCGAACAGTACCACTTCATCTCCGCCTACTTCTTCTCCTTCCCCGCCGACGGCGCCTTCGAGCTCTCCGCCACCGCCACCGTCTACCAACTCGACGGCTCCACCGCAGCTGCCGAGTCCGACGCCGCCGTCGAGTTCGGGTACGCCTGCGAATCCCGGAGGAAGTCAGGCTCCGCCTTCGGAAGCGACGCCGTCTCCCTCATCGTCGTCGGGAGTTTCGGCTGGCCTTGTGGCTGGGGTTGCCATTGCTGGAGTGGTGGTGGTGGTTGTGGCGTTGATTGTTATGTGTTTGTGTTTAAGAAAGAAGAGAAGGCGCGACGAGGAAGCGTACTACCGGCCGCCGCCGCCGCCTGCGCAACCGGCGGCGTTTAAAGATGGCCTATATGGTCCCCAACAGCACCACTGGCAATCACATCCGCTGCCGCCGGCGGATCATGTCGTGGGGACAGTACCGAAGCCGTCTCCTCCAACATCATCACGGCCGCCGCCGGCACCTCCGATTATAAACAGCAGCGGGGGTTCTGGATCTAATTATTCAGGGTCTGAAAATTCGTTGGCTCCTGCTCCATCTTCCATTCCCTTGGGCTTCTCACAGAGCAGTTTCACTTATGAAGAATTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTTCTTCCAAACGGAAAGGAAGTTGCAGTGAAGCAACTTAAAGCCGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCTGAAGTTGAAATAATCAGCCGAGTTCATCACAGACATCTTGTTTCCTTGGTGGGATATTGCATCACTGGCTCCAAAAGATTGTTGGTTTATGAATTTGTTCCGAACAACACATTGGAGTTTCACTTGCACGGGAAAGGACGACCTACCATGGATTGGCCAACGAGACTGAAAATTGCTCTGGGATCTGCCAAGGGATTGGCCTATCTTCATGAGGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAATATACTTCTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTATCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGAACTTTCGGATATCTTGCTCCTGAATACGCTTCAAGTGGGAAACTCACTGAGAAATCAGATGTGTTCTCCTTTGGAGTAATGCTTCTGGAGTTGATTACTGGACGCAGGCCTGTGGATACAACTCAATCCTTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCCACTGAAGATGGAAACTACGACGGTCTAGTAGATCCAAGACTGCGAGATAACCACGACCACAACGAGATGGTGCGCATGGTTGCTTGCGCTGCCGCCTGCGTGCGCCATTCGGCGAGGCGCCGACCACGGATGAGTCAGGTGGTTCATGCGCTTGAAGGTGAAGCCTCGCTTTCTGATCTCAACGAAGGAATCCGGCCTGGACACAGCACTGTATACAGTTCTTATGGAAGCTCCGACTACGACACGGCTCAGTACAACGAGGACTTGAAAAAGTTCAGGAAGATGGCGTTGGCGAGCCAGGAGTACGGCAGCGAGTACAGTGAGCCGACGAGCGAGTATGGTTTGTACCCATCTGGGTCGAGTGGCGACGGCCAAACAACCAGGGAAATGGAGATGAGAACGATGAAGAAAGAAAGTGTAGGTTCTAGTGGAAGTTCGTGA 1923 54.13 MSSPAPTSPPATNTTSPPPPTTVAPPPAPPSLSPPPPDTPSEPPPASSPPPSTTPSPPPPNSTTSSPPTSSPSPPTAPSSSPPPPPSTNSTAPPQLPSPTPPSSSGTPANPGGSQAPPSEATPSPSSSSGVSAGLVAGVAIAGVVVVVVALIVMCLCLRKKRRRDEEAYYRPPPPPAQPAAFKDGLYGPQQHHWQSHPLPPADHVVGTVPKPSPPTSSRPPPAPPIINSSGGSGSNYSGSENSLAPAPSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTQSFMDDGLLDWARPLLLRATEDGNYDGLVDPRLRDNHDHNEMVRMVACAAACVRHSARRRPRMSQVVHALEGEASLSDLNEGIRPGHSTVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGQTTREMEMRTMKKESVGSSGSS 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65032981 65035966 - Tan0022144.1 Tan09g1285 763628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1285 640 MobiDBLite consensus disorder prediction 597 640 - -
Tan09g1285 640 Gene3D Phosphorylase Kinase; domain 1 247 347 - -
Tan09g1285 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1285 640 SMART serkin_6 272 545 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1285 640 MobiDBLite consensus disorder prediction 205 227 - -
Tan09g1285 640 MobiDBLite consensus disorder prediction 1 106 - -
Tan09g1285 640 FunFam Proline-rich receptor-like protein kinase PERK1 348 556 - -
Tan09g1285 640 ProSiteProfiles Protein kinase domain profile. 272 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1285 640 MobiDBLite consensus disorder prediction 107 131 - -
Tan09g1285 640 MobiDBLite consensus disorder prediction 1 131 - -
Tan09g1285 640 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524(InterPro)
Tan09g1285 640 MobiDBLite consensus disorder prediction 228 243 - -
Tan09g1285 640 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 99 589 IPR047117 -
Tan09g1285 640 Pfam Protein tyrosine and serine/threonine kinase 276 545 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1285 640 Gene3D Transferase(Phosphotransferase) domain 1 348 557 - -
Tan09g1285 640 SUPERFAMILY Protein kinase-like (PK-like) 247 545 IPR011009 -
Tan09g1285 640 MobiDBLite consensus disorder prediction 597 622 - -
Tan09g1285 640 PRINTS Proline rich extensin signature 4 20 - -
Tan09g1285 640 PRINTS Proline rich extensin signature 26 43 - -
Tan09g1285 640 PRINTS Proline rich extensin signature 47 72 - -
Tan09g1285 640 FunFam proline-rich receptor-like protein kinase PERK1 250 347 - -
Tan09g1285 640 MobiDBLite consensus disorder prediction 166 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1321 Tan-Chr5:16492719 Tan09g1285 Tan-Chr9:65032981 5.00E-159 dispersed
Tan08g0168 Tan-Chr8:1415873 Tan09g1285 Tan-Chr9:65032981 8.30E-158 dispersed
Tan08g0169 Tan-Chr8:1416059 Tan09g1285 Tan-Chr9:65032981 3.10E-204 dispersed
Tan09g1162 Tan-Chr9:63947351 Tan09g1285 Tan-Chr9:65032981 1.10E-81 dispersed
Tan09g1285 Tan-Chr9:65032981 Tan11g0375 Tan-Chr11:3035853 9.10E-121 dispersed
Tan11g1617 Tan-Chr11:15754951 Tan09g1285 Tan-Chr9:65032981 7.10E-63 dispersed
Tan11g1618 Tan-Chr11:15754951 Tan09g1285 Tan-Chr9:65032981 1.40E-72 dispersed
Tan09g1285 Tan-Chr9:65032981 Tan09g1286 Tan-Chr9:65032981 1.90E-147 tandem
Tan01g0324 Tan-Chr1:2854918 Tan09g1285 Tan-Chr9:65032981 2.60E-33 transposed
Tan01g1325 Tan-Chr1:13054956 Tan09g1285 Tan-Chr9:65032981 1.50E-75 transposed
Tan02g1268 Tan-Chr2:34024371 Tan09g1285 Tan-Chr9:65032981 2.40E-70 transposed
Tan04g0473 Tan-Chr4:3871529 Tan09g1285 Tan-Chr9:65032981 5.70E-64 transposed
Tan06g0473 Tan-Chr6:3456713 Tan09g1285 Tan-Chr9:65032981 2.20E-38 transposed
Tan06g2143 Tan-Chr6:71082996 Tan09g1285 Tan-Chr9:65032981 2.00E-35 transposed
Tan11g0395 Tan-Chr11:3166273 Tan09g1285 Tan-Chr9:65032981 1.10E-75 transposed
Tan08g0167 Tan-Chr8:1415873 Tan09g1285 Tan-Chr9:65032981 3.10E-204 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68053 PF07714 PK_Tyr_Ser-Thr 4.00E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1285 - - - 0.0