Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1286 | ATGTCGTCTCCGGCTCCGACCTCGCCGCCGGCGACTAACACGACCTCACCCCCACCTCCGACCACCGTCGCACCACCCCCGGCGCCTCCATCTCTCTCACCGCCGCCTCCTGATACTCCCTCCGAGCCTCCGCCTGCTTCCTCGCCGCCGCCCTCCACCACTCCTTCGCCGCCGCCTCCGAACAGTACCACTTCATCTCCGCCTACTTCTTCTCCTTCCCCGCCGACGGCGCCTTCGAGCTCTCCGCCACCGCCACCGTCTACCAACTCGACGGCTCCACCGCAGCTGCCGAGTCCGACGCCGCCGTCGAGTTCGGGTACGCCTGCGAATCCCGGAGGAAGTCAGGCTCCGCCTTCGGAAGCGACGCCGTCTCCCTCATCGTCGTCGGGAGTTTCGGCTGGCCTTGTGGCTGGGGTTGCCATTGCTGGAGTGGTGGTGGTGGTTGTGGCGTTGATTGTTATGTGTTTGTGTTTAAGAAAGAAGAGAAGGCGCGACGAGGAAGCGTACTACCGGCCGCCGCCGCCGCCTGCGCAACCGGCGGCGTTTAAAGATGGCCTATATGGTCCCCAACAGCACCACTGGCAATCACATCCGCTGCCGCCGGCGGATCATGTCGTGGGGACAGTACCGAAGCCGTCTCCTCCAACATCATCACGGCCGCCGCCGGCACCTCCGATTATAAACAGCAGCGGGGGTTCTGGATCTAATTATTCAGGGTCTGAAAATTCGTTGGCTCCTGCTCCATCTTCCATTCCCTTGGGCTTCTCACAGAGCAGTTTCACTTATGAAGAATTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTTCTTCCAAACGGAAAGGAAGTTGCAGTGAAGCAACTTAAAGCCGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCTGAAGTTGAAATAATCAGCCGAGTTCATCACAGACATCTTGTTTCCTTGGTGGGATATTGCATCACTGGCTCCAAAAGATTGTTGGTTTATGAATTTGTTCCGAACAACACATTGGAGTTTCACTTGCACGGGAAAGGACGACCTACCATGGATTGGCCAACGAGACTGAAAATTGCTCTGGGATCTGCCAAGGGATTGGCCTATCTTCATGAGGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAATATACTTCTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTATCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGAACTTTCGGGTACCCTTTTGAACTACATTCAAGTTCAAGTCGTCAATCTGAGGGATGA | 1359 | 54.6 | MSSPAPTSPPATNTTSPPPPTTVAPPPAPPSLSPPPPDTPSEPPPASSPPPSTTPSPPPPNSTTSSPPTSSPSPPTAPSSSPPPPPSTNSTAPPQLPSPTPPSSSGTPANPGGSQAPPSEATPSPSSSSGVSAGLVAGVAIAGVVVVVVALIVMCLCLRKKRRRDEEAYYRPPPPPAQPAAFKDGLYGPQQHHWQSHPLPPADHVVGTVPKPSPPTSSRPPPAPPIINSSGGSGSNYSGSENSLAPAPSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYPFELHSSSSRQSEG | 452 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 65032981 | 65035966 | - | Tan0022144.2 | Tan09g1286 | 763629 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1286 | 452 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 392 | 404 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g1286 | 452 | PRINTS | Proline rich extensin signature | 47 | 72 | - | - | |
Tan09g1286 | 452 | PRINTS | Proline rich extensin signature | 26 | 43 | - | - | |
Tan09g1286 | 452 | PRINTS | Proline rich extensin signature | 4 | 20 | - | - | |
Tan09g1286 | 452 | SMART | serkin_6 | 272 | 447 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g1286 | 452 | Pfam | Protein tyrosine and serine/threonine kinase | 276 | 425 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 205 | 227 | - | - | |
Tan09g1286 | 452 | FunFam | Protein kinase superfamily protein | 348 | 420 | - | - | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 107 | 131 | - | - | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 1 | 131 | - | - | |
Tan09g1286 | 452 | Gene3D | Transferase(Phosphotransferase) domain 1 | 348 | 444 | - | - | |
Tan09g1286 | 452 | Gene3D | Phosphorylase Kinase; domain 1 | 246 | 347 | - | - | |
Tan09g1286 | 452 | ProSitePatterns | Protein kinases ATP-binding region signature. | 278 | 300 | IPR017441 | GO:0005524(InterPro) | |
Tan09g1286 | 452 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 99 | 438 | IPR047117 | - | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 228 | 243 | - | - | |
Tan09g1286 | 452 | SUPERFAMILY | Protein kinase-like (PK-like) | 247 | 438 | IPR011009 | - | |
Tan09g1286 | 452 | ProSiteProfiles | Protein kinase domain profile. | 272 | 452 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g1286 | 452 | FunFam | proline-rich receptor-like protein kinase PERK1 | 250 | 347 | - | - | |
Tan09g1286 | 452 | MobiDBLite | consensus disorder prediction | 166 | 243 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g1286 | Tan-Chr9:65032981 | Tan11g0375 | Tan-Chr11:3035853 | 1.50E-74 | dispersed | |
Tan09g1285 | Tan-Chr9:65032981 | Tan09g1286 | Tan-Chr9:65032981 | 1.90E-147 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68054 | PF07714 | PK_Tyr_Ser-Thr | 9.60E-32 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1286 | - | - | - | 0.0 |