Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1286 ATGTCGTCTCCGGCTCCGACCTCGCCGCCGGCGACTAACACGACCTCACCCCCACCTCCGACCACCGTCGCACCACCCCCGGCGCCTCCATCTCTCTCACCGCCGCCTCCTGATACTCCCTCCGAGCCTCCGCCTGCTTCCTCGCCGCCGCCCTCCACCACTCCTTCGCCGCCGCCTCCGAACAGTACCACTTCATCTCCGCCTACTTCTTCTCCTTCCCCGCCGACGGCGCCTTCGAGCTCTCCGCCACCGCCACCGTCTACCAACTCGACGGCTCCACCGCAGCTGCCGAGTCCGACGCCGCCGTCGAGTTCGGGTACGCCTGCGAATCCCGGAGGAAGTCAGGCTCCGCCTTCGGAAGCGACGCCGTCTCCCTCATCGTCGTCGGGAGTTTCGGCTGGCCTTGTGGCTGGGGTTGCCATTGCTGGAGTGGTGGTGGTGGTTGTGGCGTTGATTGTTATGTGTTTGTGTTTAAGAAAGAAGAGAAGGCGCGACGAGGAAGCGTACTACCGGCCGCCGCCGCCGCCTGCGCAACCGGCGGCGTTTAAAGATGGCCTATATGGTCCCCAACAGCACCACTGGCAATCACATCCGCTGCCGCCGGCGGATCATGTCGTGGGGACAGTACCGAAGCCGTCTCCTCCAACATCATCACGGCCGCCGCCGGCACCTCCGATTATAAACAGCAGCGGGGGTTCTGGATCTAATTATTCAGGGTCTGAAAATTCGTTGGCTCCTGCTCCATCTTCCATTCCCTTGGGCTTCTCACAGAGCAGTTTCACTTATGAAGAATTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTTCTTCCAAACGGAAAGGAAGTTGCAGTGAAGCAACTTAAAGCCGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCTGAAGTTGAAATAATCAGCCGAGTTCATCACAGACATCTTGTTTCCTTGGTGGGATATTGCATCACTGGCTCCAAAAGATTGTTGGTTTATGAATTTGTTCCGAACAACACATTGGAGTTTCACTTGCACGGGAAAGGACGACCTACCATGGATTGGCCAACGAGACTGAAAATTGCTCTGGGATCTGCCAAGGGATTGGCCTATCTTCATGAGGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAATATACTTCTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTATCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGAACTTTCGGGTACCCTTTTGAACTACATTCAAGTTCAAGTCGTCAATCTGAGGGATGA 1359 54.6 MSSPAPTSPPATNTTSPPPPTTVAPPPAPPSLSPPPPDTPSEPPPASSPPPSTTPSPPPPNSTTSSPPTSSPSPPTAPSSSPPPPPSTNSTAPPQLPSPTPPSSSGTPANPGGSQAPPSEATPSPSSSSGVSAGLVAGVAIAGVVVVVVALIVMCLCLRKKRRRDEEAYYRPPPPPAQPAAFKDGLYGPQQHHWQSHPLPPADHVVGTVPKPSPPTSSRPPPAPPIINSSGGSGSNYSGSENSLAPAPSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYPFELHSSSSRQSEG 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65032981 65035966 - Tan0022144.2 Tan09g1286 763629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1286 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1286 452 PRINTS Proline rich extensin signature 47 72 - -
Tan09g1286 452 PRINTS Proline rich extensin signature 26 43 - -
Tan09g1286 452 PRINTS Proline rich extensin signature 4 20 - -
Tan09g1286 452 SMART serkin_6 272 447 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1286 452 Pfam Protein tyrosine and serine/threonine kinase 276 425 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1286 452 MobiDBLite consensus disorder prediction 205 227 - -
Tan09g1286 452 FunFam Protein kinase superfamily protein 348 420 - -
Tan09g1286 452 MobiDBLite consensus disorder prediction 1 106 - -
Tan09g1286 452 MobiDBLite consensus disorder prediction 107 131 - -
Tan09g1286 452 MobiDBLite consensus disorder prediction 1 131 - -
Tan09g1286 452 Gene3D Transferase(Phosphotransferase) domain 1 348 444 - -
Tan09g1286 452 Gene3D Phosphorylase Kinase; domain 1 246 347 - -
Tan09g1286 452 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524(InterPro)
Tan09g1286 452 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 99 438 IPR047117 -
Tan09g1286 452 MobiDBLite consensus disorder prediction 228 243 - -
Tan09g1286 452 SUPERFAMILY Protein kinase-like (PK-like) 247 438 IPR011009 -
Tan09g1286 452 ProSiteProfiles Protein kinase domain profile. 272 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1286 452 FunFam proline-rich receptor-like protein kinase PERK1 250 347 - -
Tan09g1286 452 MobiDBLite consensus disorder prediction 166 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1286 Tan-Chr9:65032981 Tan11g0375 Tan-Chr11:3035853 1.50E-74 dispersed
Tan09g1285 Tan-Chr9:65032981 Tan09g1286 Tan-Chr9:65032981 1.90E-147 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68054 PF07714 PK_Tyr_Ser-Thr 9.60E-32 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1286 - - - 0.0