Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1303 ATGGAAGTCTGGAAACGTTGGGCTTCATTTTCGCATCGGTGCAGATTTGCCTATATAAACCGTCTTCGGTTCTCCCCTAAAAAACGCCACTTCACCGGAAATTCTTATTTTTTTCCGTTCACAAAAACACACATATTACACAGAAAGACGATGGAGAATCACTGCAATGGAAATTCTGAATCCCATGTCAACATGATACCCAAAATCAAGTTCACCAAGCTCTTCATCAATGGACAGTTCGTTGACTCTGTTTCAGGGAAAACTTTCGAGACGATAGATCCAAGAACCGGTGAGGTTATCACGACGGTCGCCGCCGGTGAAAAAGAAGATGTCGATCTTGCCGTGAAAGCTGCCCGTGAAGCCTTTGACCACGGCCCTTGGCCCCGCATGTCCGGCGCCGAGAGAGGGAGGATAATGATGAAACTCGCGGACTTAGTAGATGAACACGTGGAGGAACTGGCAGCGTTGGATACGATCGACGGGGGAAAATCGTTTAAGATGGGGAAGATCGCGGACATACCGTCGGCTTCAAATATGCTACGGTACTACGCAGGTGCAGCGGATAAAATCCACGGGGAGGTATTGAAAATGGCAAGGCCGTTTCACGGTTACACGTTAATGGAACCGATGGGAGTGGTGGGCCACATCATACCGTGGAATTTTCCGACGACCATGTTCTTCTTGAAAGTGAGCCCGGCGTTGGCCGCCGGCTGCACCATGCTCGTCAAGCCCGCCGAGCAGACGCCCCTCTCCGCCCTCTTCTACGCCCATCTCGCCAAACTGGCTGGTATTCCAGATGGAGTACTGAACGTTGTGACTGGATATGGATCCACGGCAGGATCAGCCATTGCGTCCCACATGGACATTGACAAGGTGAGTTTCACAGGATCAACGAAAGTGGGAAGACTAATAATGCAGGCGGCAAGTGAGAGTAATCTGAAGCAAGTGTCGTTGGAATTAGGAGGCAAATCACCCCTCCTAATCTTTGATGATGCCGATGTGAATAAAGCCGCTGATCTTGCTCTTCTCGGCATTTTTTATAACAAGGGAGAAATTTGCGTGGCCAGCTCCCGAGTTTTGGTACAAGAAGGGATTTATGATGAATTTGTGAAAAGGATTAGTGAAAAGGCCAAATCTTGGGTGGTCGGAGACCCTTTTGATCCCAAAGTTCAATATGGACCCCAGGTGGACAAAAAGCAATTCGAGAAAATTCTGAAATACATAGAACACGGTAAAAAGGAAGGAGCGACATTACTGACAGGCGGGAAGAGCATAGGCGAAGTGGGATATTACATAGAGCCAACAATCTTCACAGACGTCAAGGAAGACTCACTGATCGCACAGGACGAGATCTTCGGCCCAGTCCTGTCCGTCATAAAATTCAAAACGATCGAAGAAGGAATAAAGAGTGCAAACAACACCAAGTACGGGCTAGCGGCTGGAATAGTGACGAACAATGTAGACATAATGAACAGAGTTTCGAGATCGATCAGAGCTGGAACGATTTGGGTGAATTGTTACTTTGCTTTCGACCCGAGCTGTCCATTTGGAGGGTACAAAATGAGTGGGTTCGGTAGAGACTCGGGAATGCACGCAGTTCATAAGTATCTTCAAACCAAATCCGTCGTCACTCCTTTGGTTAACACTCCTTGGCTTTGA 1659 48.04 MEVWKRWASFSHRCRFAYINRLRFSPKKRHFTGNSYFFPFTKTHILHRKTMENHCNGNSESHVNMIPKIKFTKLFINGQFVDSVSGKTFETIDPRTGEVITTVAAGEKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMMKLADLVDEHVEELAALDTIDGGKSFKMGKIADIPSASNMLRYYAGAADKIHGEVLKMARPFHGYTLMEPMGVVGHIIPWNFPTTMFFLKVSPALAAGCTMLVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGSTAGSAIASHMDIDKVSFTGSTKVGRLIMQAASESNLKQVSLELGGKSPLLIFDDADVNKAADLALLGIFYNKGEICVASSRVLVQEGIYDEFVKRISEKAKSWVVGDPFDPKVQYGPQVDKKQFEKILKYIEHGKKEGATLLTGGKSIGEVGYYIEPTIFTDVKEDSLIAQDEIFGPVLSVIKFKTIEEGIKSANNTKYGLAAGIVTNNVDIMNRVSRSIRAGTIWVNCYFAFDPSCPFGGYKMSGFGRDSGMHAVHKYLQTKSVVTPLVNTPWL 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65254879 65258983 + Tan0002375.1 Tan09g1303 763646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1303 552 FunFam Aldehyde dehydrogenase3 322 511 - -
Tan09g1303 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 540 IPR016162 GO:0016491(InterPro)
Tan09g1303 552 SUPERFAMILY ALDH-like 64 548 IPR016161 GO:0016491(InterPro)
Tan09g1303 552 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 76 343 - -
Tan09g1303 552 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 318 325 IPR029510 GO:0016491(InterPro)
Tan09g1303 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 322 511 IPR016163 GO:0016620(InterPro)
Tan09g1303 552 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 64 544 - GO:0004029(PANTHER)
Tan09g1303 552 FunFam Aldehyde dehydrogenase, putative 514 540 - -
Tan09g1303 552 Pfam Aldehyde dehydrogenase family 80 542 IPR015590 GO:0016491(InterPro)
Tan09g1303 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 346 357 IPR016160 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0579 Tan-Chr5:4204377 Tan09g1303 Tan-Chr9:65254879 3.00E-93 dispersed
Tan06g2751 Tan-Chr6:79794649 Tan09g1303 Tan-Chr9:65254879 3.00E-38 dispersed
Tan07g0743 Tan-Chr7:11833641 Tan09g1303 Tan-Chr9:65254879 2.30E-28 dispersed
Tan09g1303 Tan-Chr9:65254879 Tan09g2233 Tan-Chr9:72300960 7.70E-161 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1303 K12355 - csv:101219029 880.552