Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1307 ATGGGTTCGCCAAAAAGTGAACAAAATGTGAGCTTTGCTGCTCCGAGATCATTCGGAAAGAAGCTGAAATCGGATCTGAAAGAAACGTTTTTCCCCGATGATCCGTTCAAGCAATTTCGCGATGATAGGCCAATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTTTTTGTTCCCCGCTTATATATGCGGTGTTCGGAAGTTCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATGGCTCAATGGTGACAGTGATAATCGGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACATAGTAATGGCGATCTTCATGGCTTTCACCCTCCTCTTTCTCGCTCCTCTCTTCAGCTACACACCCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGTAATGATCCATTATATTTATCCTTCTGTTCCGAATCCTCTACTCTCACTCAACAACCTTGA 1725 44.93 MGSPKSEQNVSFAAPRSFGKKLKSDLKETFFPDDPFKQFRDDRPMHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLFLFPAYICGVRKFKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLKQKPEAILGFSDGSMVTVIIGCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMAFTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGNDPLYLSFCSESSTLTQQP 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65318837 65322438 + Tan0005744.1 Tan09g1307 763650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1307 574 Gene3D STAS domain 477 557 IPR036513 -
Tan09g1307 574 Pfam Sulfate permease family 70 447 IPR011547 GO:0016020(InterPro)
Tan09g1307 574 ProSiteProfiles STAS domain profile. 497 555 IPR002645 -
Tan09g1307 574 PANTHER SULFATE TRANSPORTER 26 555 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1307 574 Pfam STAS domain 498 555 IPR002645 -
Tan09g1307 574 NCBIfam sulfate permease 57 554 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1307 Tan-Chr9:65318837 Tan09g1310 Tan-Chr9:65384233 4.90E-291 dispersed
Tan09g1307 Tan-Chr9:65318837 Tan09g1309 Tan-Chr9:65384233 2.50E-279 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1307 K17471 - csv:105435742 897.116