Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1309 ATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTATTCGAGTTTTGTTCCCCCGCTTATATATGCGGTGTTCGGAAGTTCCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATAGCTCAATGGTGACAGTGATAATCAGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACATAGTAATGGCGATCTTCATGGCTTTCACCCTCCTCTTTCTCGCTCCTCTCTTCAGCTACACACCCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACTCTAATCGAAATCCGCAGATCGTTAAAAGCATTCGGAGTTCAGATGGGAATTGTGAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCGGAATTTGTAGACATGATCGGGAAAGAAAACATCTATTTGTCGGTAGACGAAGGAGTGGAAAGCTGTAGAGATTCGGTGTACAAACCGAAGAAGCAAATAAATGCAAGTGAGGGGAGCTCCAATGTGACAGCAATGGAGCAACGGGTATAA 1818 44.83 MHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLKQKPEAILGFSDSSMVTVIIRCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMAFTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGVTSIDMTGIETLIEIRRSLKAFGVQMGIVNPRIVVMEKMIASEFVDMIGKENIYLSVDEGVESCRDSVYKPKKQINASEGSSNVTAMEQRV 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65384233 65387699 - Tan0001048.1 Tan09g1309 763652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1309 605 Gene3D STAS domain 436 581 IPR036513 -
Tan09g1309 605 Pfam STAS domain 457 573 IPR002645 -
Tan09g1309 605 FunFam Sulfate transporter 31 436 581 - -
Tan09g1309 605 PANTHER SULFATE TRANSPORTER 3 580 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1309 605 Pfam Sulfate permease family 26 406 IPR011547 GO:0016020(InterPro)
Tan09g1309 605 NCBIfam sulfate permease 13 573 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1309 605 CDD STAS_SulP_like_sulfate_transporter 457 571 - -
Tan09g1309 605 ProSitePatterns SLC26A transporters signature. 55 76 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan09g1309 605 ProSiteProfiles STAS domain profile. 456 578 IPR002645 -
Tan09g1309 605 SUPERFAMILY SpoIIaa-like 459 579 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1309 Tan-Chr9:65384233 Tan09g1312 Tan-Chr9:65438692 3.80E-302 dispersed
Tan09g1307 Tan-Chr9:65318837 Tan09g1309 Tan-Chr9:65384233 2.50E-279 proximal
Tan09g1309 Tan-Chr9:65384233 Tan09g1310 Tan-Chr9:65384233 2.30E-291 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1309 K17471 - csv:116402148 987.638