Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1310 ATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTATTCGAGTTTTGTTCCCCCGCTTATATATGCGGTGTTCGGAAGTTCCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATAGCTCAATGGTGACAGTGATAATCAGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACATAGTAATGGCGATCTTCATGGCTTTCACCCTCCTCTTTCTCGCTCCTCTCTTCAGCTACACACCCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGTAATGATCCATTATATTTATCCTTCTGTTCCGAATCCTCTACTCTCACTCAACAACCTTGA 1602 44.88 MHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLKQKPEAILGFSDSSMVTVIIRCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMAFTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGNDPLYLSFCSESSTLTQQP 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65384233 65387699 - Tan0001048.2 Tan09g1310 763653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1310 533 Gene3D STAS domain 436 516 IPR036513 -
Tan09g1310 533 Pfam Sulfate permease family 26 406 IPR011547 GO:0016020(InterPro)
Tan09g1310 533 NCBIfam sulfate permease 13 513 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1310 533 PANTHER SULFATE TRANSPORTER 3 514 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1310 533 ProSiteProfiles STAS domain profile. 456 514 IPR002645 -
Tan09g1310 533 Pfam STAS domain 457 514 IPR002645 -
Tan09g1310 533 ProSitePatterns SLC26A transporters signature. 55 76 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1307 Tan-Chr9:65318837 Tan09g1310 Tan-Chr9:65384233 4.90E-291 dispersed
Tan09g1310 Tan-Chr9:65384233 Tan09g1314 Tan-Chr9:65438692 7.80E-259 dispersed
Tan09g1309 Tan-Chr9:65384233 Tan09g1310 Tan-Chr9:65384233 2.30E-291 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1310 K17471 - csv:105435742 865.914