Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1311 ATGAGTCCCAACTCCCATTTCAACCTTTCACTCCTCCTCCTTCTCCTCCCGGCATTCCTCTCCGCCGCCGTCGGCCATGGCACCCTCTCCGACGCCGAAGCTCTCTACATCCGGCAGCGCCAGCTTCTGTACTACAGAGACGAGTTCGGCGACCGTGGCGAAGAACTCACTGTCGACCCATCTCTTGTTTTCGAAAACGGAAGGATCAGAAACGCTTACATTGCTCTTCAGGCTTGGAAACTTGCCATTTTGTCCGACCCTCTGAATCAAACCGCCAATTGGGTCGGATCTGATGTCTGCACCTACACCGGCGTTTACTGTGCTCCTGCATTGGATAACCCCAAGATCCGTACAGTCGCCGGCATCGATCTCAACCATGGCGACATTGCCGGATACCTCCCCGAAGAGCTCGGTTTGCTTGTAGATCTTGCATTGTTTCACATCAACTCCAACAGATTCTGCGGCACTGTACCTCACAAATTCGACCGTCTCAAGTTGCTTTACGAATTGGATCTCAGTAACAATCGGTTCGCCGGGAAGTTTCCTGATGTAGTTCTCAGGCTTCCAACGCTCAAGTTTTTGGATCTGAGGTTTAACGAATTTGAAGGCAGTGTACCCAAAGAGCTGTTTGATAAAGATTTGGACGCCATTTTTATTAACCACAACAGGTTCAGATTCGAACTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTGCTGGCGAACAATAAGTTCCATGGGTGTTTGCCTTCGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGGCTTAATTCTTGCTTGCCGCCGGAAATTGGGGCGTTGAAGAACTTGACGGTGTTCGATGTTAGTTCGAATGAGTTGGTGGGGCCGTTGCCGGAGACTTTTGGAGGGCTTGTGAGTTTGGAGCAACTGAATGTGGCTAATAATTTTCTTTCTGGGAAGATTCCGGTGAGTATTTGTGATTTGCCTAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTCTCCGGTGAGCCGCCATCGTGTTTGAGGGTTCCGGATTTCAGTGATCGGAGAAATTGCTTACCAGGACGGCCGGCGCAGCGGTCGAGTGGGCAATGTAAGTCGTTTTTGTCGACGCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCTTCTGGTTCGCCTTCTTCTCCGTTTACTCCTCCGGTTGTTTCACCCTCTTCGCCTCCGTCACCTGTGGCGCCGTCGTCCCCTCCCTCGCCATCTCTGTCTCCAAATACACCGCCGGCACCGTCATTGTCGCCTCATTTTCCTCCTCTGTCGCCACAATCGCCACCGTCTCTGCCTTCTTCCCCACCTACGCCGTCGCCTTCATCTCCGGCTACACCTACAACCCCTTCATCGCCACCTCAAGGTCATGCTCCGCCGTCATTGCCCTCACCTCCCTCGCCGCCACAAGGTCATACTTCGCCAGCATTCCCTCCGCCGGCATTACCCTCACCATCATCGCCGCCGCAAGGCCATACTTCGCCGAGTCCACCTTCTCCGTCCGAGCCCTCACCATCATCGCCGCCGAAGGGCCATACTCCGCCGAGTCCAAGTTCGCCGCCCGAGCCGTCTCCGTCATCGCCACCACAAGGCCATACTCCGCTGGGTCCACCTTCGCCGTCCGAGCCCTCACCATCATCGCCGCCACAAGGTCACACTCCGGCGGCTCCTCCTTCGCCGTCTGAGCCATCACCTTCATCCCCGCCACAGGGCCATATTCCGCCGGCTGAGCCTTCTCCTCCTGGAATATCAACACCATCAGCACCGCCATTCCCAGTTTACACTCCGCCTCCGCCGCATTTCCCTGATTTCCCTTCGCCACCATCTACACAACCTCCGGTCTACTGCCCACGATCCCCAAATCCACCATCTCCTCCATCCTACTCCCCAAACCCACCTCTCCATCGCCCCATCTCCCCGCCGCCGCTACCTGTTCATTCTCCGCCTCCTCCTGTCTACACATCGCCGTCCCCGCTCCCTCTTCCTTGCATACAACCTCCTCCACCTCCCCCACCAGGTGTTCAATATCCAGAGCCACCGCCTCCAGCACCGTCTTCTCCGATTTACTACAACTCCCCACCACCTCCGGTGCATTACCAATCTCCTCCCTCACCTTCTCCAATATACTATAACTCCCCACCGCCGCCGCCTCCCTCGCCCCCACCTCCGGTGGTTTATGAAAGCCCGCCGCCGCCATTTGTCTACCAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGAGGCCCACTGCCACCAATCTATGGGGTTCCCTACGCCTCTCCTCCCCCTCCACCCTTCTATTAA 2361 55.44 MSPNSHFNLSLLLLLLPAFLSAAVGHGTLSDAEALYIRQRQLLYYRDEFGDRGEELTVDPSLVFENGRIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCAPALDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGKFPDVVLRLPTLKFLDLRFNEFEGSVPKELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVLANNKFHGCLPSSLGNMTRLNEIIMMNNGLNSCLPPEIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGKIPVSICDLPKLQNFTFSNNFFSGEPPSCLRVPDFSDRRNCLPGRPAQRSSGQCKSFLSTPVDCNAFKCGGSSSGSPSSPFTPPVVSPSSPPSPVAPSSPPSPSLSPNTPPAPSLSPHFPPLSPQSPPSLPSSPPTPSPSSPATPTTPSSPPQGHAPPSLPSPPSPPQGHTSPAFPPPALPSPSSPPQGHTSPSPPSPSEPSPSSPPKGHTPPSPSSPPEPSPSSPPQGHTPLGPPSPSEPSPSSPPQGHTPAAPPSPSEPSPSSPPQGHIPPAEPSPPGISTPSAPPFPVYTPPPPHFPDFPSPPSTQPPVYCPRSPNPPSPPSYSPNPPLHRPISPPPLPVHSPPPPVYTSPSPLPLPCIQPPPPPPPGVQYPEPPPPAPSSPIYYNSPPPPVHYQSPPSPSPIYYNSPPPPPPSPPPPVVYESPPPPFVYQSPPPPPTPVYGGPLPPIYGVPYASPPPPPFY 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65422738 65425098 + Tan0000140.1 Tan09g1311 763654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1311 786 Pfam Leucine rich repeat 284 341 IPR001611 GO:0005515(InterPro)
Tan09g1311 786 Pfam Leucine rich repeat N-terminal domain 75 107 IPR013210 -
Tan09g1311 786 SUPERFAMILY L domain-like 81 352 - -
Tan09g1311 786 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 702 IPR051582 -
Tan09g1311 786 MobiDBLite consensus disorder prediction 394 742 - -
Tan09g1311 786 FunFam Leucine-rich repeat extensin-like protein 1 73 234 - -
Tan09g1311 786 Gene3D Ribonuclease Inhibitor 73 359 IPR032675 -
Tan09g1311 786 FunFam Leucine-rich repeat extensin-like protein 5 235 374 - -
Tan09g1311 786 MobiDBLite consensus disorder prediction 402 742 - -
Tan09g1311 786 Pfam Leucine Rich Repeat 167 184 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4848 Tan-Chr1:114211412 Tan09g1311 Tan-Chr9:65422738 1.40E-40 transposed
Tan02g0208 Tan-Chr2:1755214 Tan09g1311 Tan-Chr9:65422738 3.70E-30 transposed
Tan06g2003 Tan-Chr6:64911250 Tan09g1311 Tan-Chr9:65422738 1.70E-41 transposed
Tan10g0798 Tan-Chr10:6686244 Tan09g1311 Tan-Chr9:65422738 8.30E-32 transposed
Tan08g0179 Tan-Chr8:1557380 Tan09g1311 Tan-Chr9:65422738 2.90E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1311 - - - 0.0