Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1312 ATGGGTTCGCCAAAAAGTGAACAAAATGTGAGCTTTGCTGCTCCGAGATCATTCGGAAAGAAGCTGAAATCGGATCTGAAAGAAACGTTTTTCCCCGATGATCCGTTCAAGCAATTTCGCGATGATAGGCCAATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTATTCGAGTTTTGTTCCCCCGCTTATATATGCGGTGTTCGGAAGTTCCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATGGCTCCAATGGTGACAGTGATAATCGGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGCTACACACACCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACTCTAATCGAAATCCGCAGATCGTTAAAAGCATTCGGAGTTCAGATGGGAATTGTGAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCGGAATTTGTAGACATGATCGGGAAAGAAAACATCTATTTGTCGGTAGACGAAGGAGTGGAAAGCTGTAGAGATTCGGTGTACAAACCGAAGAAGCAAATAAATGCAAGTGAGGGGAGCTCCAATGTGACAGCAATGGAGCAGCGGGTATAA 1839 44.92 MGSPKSEQNVSFAAPRSFGKKLKSDLKETFFPDDPFKQFRDDRPMHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTATHTLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGVTSIDMTGIETLIEIRRSLKAFGVQMGIVNPRIVVMEKMIASEFVDMIGKENIYLSVDEGVESCRDSVYKPKKQINASEGSSNVTAMEQRV 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65438692 65442145 + Tan0021789.1 Tan09g1312 763655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1312 612 CDD STAS_SulP_like_sulfate_transporter 464 578 - -
Tan09g1312 612 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan09g1312 612 PANTHER SULFATE TRANSPORTER 26 372 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1312 612 SUPERFAMILY SpoIIaa-like 466 586 IPR036513 -
Tan09g1312 612 Pfam Sulfate permease family 70 373 IPR011547 GO:0016020(InterPro)
Tan09g1312 612 Pfam Sulfate permease family 377 413 IPR011547 GO:0016020(InterPro)
Tan09g1312 612 Gene3D STAS domain 443 588 IPR036513 -
Tan09g1312 612 ProSiteProfiles STAS domain profile. 463 585 IPR002645 -
Tan09g1312 612 FunFam Sulfate transporter 31 443 588 - -
Tan09g1312 612 Pfam STAS domain 464 580 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1309 Tan-Chr9:65384233 Tan09g1312 Tan-Chr9:65438692 3.80E-302 dispersed
Tan09g1312 Tan-Chr9:65438692 Tan09g1314 Tan-Chr9:65438692 2.90E-294 dispersed
Tan09g1312 Tan-Chr9:65438692 Tan09g1313 Tan-Chr9:65438692 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1312 K17471 - csv:116402148 989.178