Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1313 ATGGGTTCGCCAAAAAGTGAACAAAATGTGAGCTTTGCTGCTCCGAGATCATTCGGAAAGAAGCTGAAATCGGATCTGAAAGAAACGTTTTTCCCCGATGATCCGTTCAAGCAATTTCGCGATGATAGGCCAATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTATTCGAGTTTTGTTCCCCCGCTTATATATGCGGTGTTCGGAAGTTCCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATGGCTCCAATGGTGACAGTGATAATCGGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGCTACACACACCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTCAGTAACTTTTGTCATAACATAAAAAGGGGAGTTTCAAAACTCAAATTTCCTTACATATGGGACTCTGTTATGATTTTCTATCAGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACTCTAATCGAAATCCGCAGATCGTTAAAAGCATTCGGAGTTCAGATGGGAATTGTGAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCGGAATTTGTAGACATGATCGGGAAAGAAAACATCTATTTGTCGGTAGACGAAGGAGTGGAAAGCTGTAGAGATTCGGTGTACAAACCGAAGAAGCAAATAAATGCAAGTGAGGGGAGCTCCAATGTGACAGCAATGGAGCAGCGGGTATAA 1926 44.34 MGSPKSEQNVSFAAPRSFGKKLKSDLKETFFPDDPFKQFRDDRPMHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTATHTLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVSNFCHNIKRGVSKLKFPYIWDSVMIFYQVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGVTSIDMTGIETLIEIRRSLKAFGVQMGIVNPRIVVMEKMIASEFVDMIGKENIYLSVDEGVESCRDSVYKPKKQINASEGSSNVTAMEQRV 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65438692 65442145 + Tan0021789.2 Tan09g1313 763656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1313 641 FunFam Sulfate transporter 31 472 617 - -
Tan09g1313 641 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan09g1313 641 PANTHER SULFATE TRANSPORTER 26 372 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1313 641 Pfam Sulfate permease family 70 373 IPR011547 GO:0016020(InterPro)
Tan09g1313 641 Pfam Sulfate permease family 377 413 IPR011547 GO:0016020(InterPro)
Tan09g1313 641 ProSiteProfiles STAS domain profile. 492 614 IPR002645 -
Tan09g1313 641 CDD STAS_SulP_like_sulfate_transporter 493 607 - -
Tan09g1313 641 Gene3D STAS domain 472 617 IPR036513 -
Tan09g1313 641 SUPERFAMILY SpoIIaa-like 495 615 IPR036513 -
Tan09g1313 641 Pfam STAS domain 493 609 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1313 Tan-Chr9:65438692 Tan10g0797 Tan-Chr10:6672866 8.40E-175 dispersed
Tan09g1312 Tan-Chr9:65438692 Tan09g1313 Tan-Chr9:65438692 0.00E+00 tandem
Tan09g1313 Tan-Chr9:65438692 Tan09g1314 Tan-Chr9:65438692 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1313 K17471 - csv:116402148 981.859