Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1314 ATGGGTTCGCCAAAAAGTGAACAAAATGTGAGCTTTGCTGCTCCGAGATCATTCGGAAAGAAGCTGAAATCGGATCTGAAAGAAACGTTTTTCCCCGATGATCCGTTCAAGCAATTTCGCGATGATAGGCCAATGCACCAATTGAAAAAGGGCGTTCAATATTTCATTCCCATATTGGAATGGCTTCCTAAATACACATTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATTATCGGCCTTTATTCGAGTTTTGTTCCCCCGCTTATATATGCGGTGTTCGGAAGTTCCAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATTGCGGAGATCATCGGACAAGTGGCGTCACCGGAAAAAGAACCTACATTGTATCTCCACTTGGTTTTCACCGCCACCTTAATCACCGGCCTCATGCAAGCCATCTTAGGCATTCTACGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACGATCCTTGGATTTATGGGAGGGACGGCTGTGATCATTTGCCTACAGCAACTGAAAGGCATATTTGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCCGTACTCCATGCGGTTTTGTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCGTGGGCATCGTCTTCCTTGTATTCCTCCAGTTTACTAGGTACCTGAGAAACAGAAACCCGAAGCTATTTTGGGTTTCAGCGATGGCTCCAATGGTGACAGTGATAATCGGGTGTTTGTTTGCGTATTTCATCGATGGAAATAAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTATTTCTATTCATTTCTTGAACTTTGACTCAAAATATCTATCAGCTGTAATACGAGCTGGCTTGATCACTGGCCTTGTGGCTATGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCCATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGCTCGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCCTGCTACTTAACCACTGCTACACACACCCTTGTAGCCCTTTCTGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATACGAAGAGATCTACAATCTTCTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCAGCTTTCTGGGGTGTTGCCCTGTTAAGCATGGATGTTGGCATCATGCTCTCGGTCAGTAACTTTTGTCATAACATAAAAAGGGGAGTTTCAAAACTCAAATTTCCTTACATATGGGACTCTGTTATGATTTTCTATCAGGTGGGTCTTGCTTTGTTGAGAGCTCTTCTTTACATGGCTAGACCAGCGACTTGCAAGCTTGGGAAAATACCAAACACCGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAACCGGAGTCCCTGGAATCATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCATGTCATATCTGATTCCAATGTTGGACCAGTCCAACATGTACTGCTGGAATTTAGTGGTAATGATCCATTATATTTATCCTTCTGTTCCGAATCCTCTACTCTCACTCAACAACCTTGA 1710 44.27 MGSPKSEQNVSFAAPRSFGKKLKSDLKETFFPDDPFKQFRDDRPMHQLKKGVQYFIPILEWLPKYTLNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIAEIIGQVASPEKEPTLYLHLVFTATLITGLMQAILGILRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVLSLRNEWKWQSAVVGIVFLVFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIDGNKHGILTVGHLSKGINPISIHFLNFDSKYLSAVIRAGLITGLVAMAEGIAIGRSFAIMKNEQIDGNKEMLAFGLMNIVGSFTSCYLTTATHTLVALSAIIMSAMLGLIKYEEIYNLLKVDKFDFCICMAAFWGVALLSMDVGIMLSVSNFCHNIKRGVSKLKFPYIWDSVMIFYQVGLALLRALLYMARPATCKLGKIPNTDLYRDVEQYPNATGVPGIIVLQLGSPVYYANANYIRERIFRWIRDEHVISDSNVGPVQHVLLEFSGNDPLYLSFCSESSTLTQQP 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65438692 65442145 + Tan0021789.3 Tan09g1314 763657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1314 569 Gene3D STAS domain 472 552 IPR036513 -
Tan09g1314 569 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan09g1314 569 PANTHER SULFATE TRANSPORTER 26 372 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1314 569 Pfam Sulfate permease family 70 373 IPR011547 GO:0016020(InterPro)
Tan09g1314 569 Pfam Sulfate permease family 377 413 IPR011547 GO:0016020(InterPro)
Tan09g1314 569 Pfam STAS domain 493 550 IPR002645 -
Tan09g1314 569 ProSiteProfiles STAS domain profile. 492 550 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1310 Tan-Chr9:65384233 Tan09g1314 Tan-Chr9:65438692 7.80E-259 dispersed
Tan09g1312 Tan-Chr9:65438692 Tan09g1314 Tan-Chr9:65438692 2.90E-294 dispersed
Tan09g1314 Tan-Chr9:65438692 Tan10g0797 Tan-Chr10:6672866 1.20E-159 dispersed
Tan09g1313 Tan-Chr9:65438692 Tan09g1314 Tan-Chr9:65438692 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1314 K17471 - csv:105435742 860.136