Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1335 ATGGCTGCAATTTTTCACTCTAGAATCCGCATCCCCATTTTCTTAATTTCACTTCCCCTTCTTCTTCTTCTTCATTTTGTTCACTCGGAGCCCTCCGCCGACAAGGAAGCGCTTCTTGATTTCTTGAACAAAATCCCCCATGAGAGCCGCCTTCAATGGAATGCTTCGGCCTCTGCTTGTTCTTGGGTTGGAGTTAGCTGCGATGCGAATCAGTCGTTTGTTTTTGCTCTCCGGTTGCCTGGTGTTGGACTTGTCGGCCCGATTCCGGCGAATACTCTCGGCCGGTTGAATCGGCTCCGGGTTTTGAGTCTTCGCTCTAATAGAATTTCTGGGACTTTGCCGGCGGATTTTTCCAATTTGACATCTCTTCGGAGTCTTTATCTGCAGGATAACGAGCTCTCCGGTGGGTTTCCGGTAAGTGTGACTCAGTTGACTCGGTTGACTCGTCTCGACCTCTCTTCCAACAATTTCTCTGGTTCGATTCCGTTTTCGGTCAATAATTTGACTCATTTAAGTGGGCTTTTTCTGGAGAATAATGAGTTTTCGGGTTCTTTGCCGAGTATTCCTGCGGTTAATTTAACGAGCTTCAACGTATCGAATAATCAGCTCAATGGATCCATTCCCGAAACCCTATCGAAATTCTCTGCTGCATCTTTCGCCGGAAATTTAGCGCTCTGCGGTAGCCCATTGCCGTCGTGCAACCCGTTTTTTCCGTCCCCTGCTCCGTCACCGACGCCCGCTGTGAAACCCTCTCAAATTCCCGTCGAGAAAAAGTCTAAGAGGCTCTCGGTCGCCGCCATTGTCGGAATAGTCGTCGGCGCTGCTTTTGTTGCGTTTCTATTGCTGTTTTTGCTCCTATTCTGCCTCCGGAAGCGCGAGAGTCGGCAGCCGGCGAAGCCGCCGAGTACGGTGGTTACTGCTCGATCTGTGCCCGCGGAGGCCGGCACATCATCTTCGAAAGACGACATCACCGGCGGATCGGTGGAGGCAGAGAAAAACAGATTAGTGTTCTTCGAAGGTGGGGTTTACAGCTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTTTTGGGAAAAGGAAGCGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTCGTCGTGAAGAGATTGAAAGACGTTGTAATGACGAAGAAGGAATTCGAAGCGCAAATGGAATCTCTGGGAAATGTTAAACATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTTTCCAGAGACGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCTGCTTCACTTCACGGAAGTAGAGGATCTGGCCGTACGCCACTTGACTGGGACAACCGGATGAAAATCGCGTTAAACGCAGCAAGAGGACTGGCTCACCTCCACGTGTCGGGAAATCTCGTCCACGGCAACATCAAATCGTCGAACATCCTCCTCCGCCCCAACCACGACGCCGGCGTCTCCGACTACGGCCTCAACCCTCTCTTCGGCGCCTCGACGCCGCCCAACCGGATCGCCGGCTACCGCGCGCCGGAGGTTGTCGAAACTCGAAAGGTCACCTTCAAGTCCGACGTGTACAGTTTTGGCGTCTTGCTGTTGGAGCTTCTGACTGGAAAATCGCCAAATCAGGCGTCGTTGGGCGAAGAAGGGATTGATCTTCCCCGGTGGGTCCAGTCGGTGGTCCGAGAGGAATGGACGGCGGAGGTTTTTGATGTGGAATTGATGAGGTATCACAATATCGAAGAAGAGATGGTTCAGTTGTTACAAATTGCTATGGCCTGTGTCGCCACCGTGCCGGACCAGCGGCCGTCGATGCAGGAGGTGGTTCGTATGATTGAGGAGTTAAACCGTGTAGAGACCGACGACGGCTTACGGCCGTCGTCCGATGACCCGTCGAAAGGATCGGAGGGCCACACGCCGCCGCAGGAGTCCAGAACCACCCCTCCCGGAGCCGGCGGACCACCGTAG 1983 53.05 MAAIFHSRIRIPIFLISLPLLLLLHFVHSEPSADKEALLDFLNKIPHESRLQWNASASACSWVGVSCDANQSFVFALRLPGVGLVGPIPANTLGRLNRLRVLSLRSNRISGTLPADFSNLTSLRSLYLQDNELSGGFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTHLSGLFLENNEFSGSLPSIPAVNLTSFNVSNNQLNGSIPETLSKFSAASFAGNLALCGSPLPSCNPFFPSPAPSPTPAVKPSQIPVEKKSKRLSVAAIVGIVVGAAFVAFLLLFLLLFCLRKRESRQPAKPPSTVVTARSVPAEAGTSSSKDDITGGSVEAEKNRLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKKEFEAQMESLGNVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSASLHGSRGSGRTPLDWDNRMKIALNAARGLAHLHVSGNLVHGNIKSSNILLRPNHDAGVSDYGLNPLFGASTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEELNRVETDDGLRPSSDDPSKGSEGHTPPQESRTTPPGAGGPP 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65636570 65640074 + Tan0022403.1 Tan09g1335 763678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1335 660 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 427 629 - -
Tan09g1335 660 SUPERFAMILY Protein kinase-like (PK-like) 356 618 IPR011009 -
Tan09g1335 660 FunFam pollen receptor-like kinase 1 322 426 - -
Tan09g1335 660 CDD STKc_IRAK 358 620 - -
Tan09g1335 660 ProSiteProfiles Protein kinase domain profile. 352 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1335 660 Gene3D Phosphorylase Kinase; domain 1 320 426 - -
Tan09g1335 660 SUPERFAMILY L domain-like 42 214 - -
Tan09g1335 660 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Tan09g1335 660 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Tan09g1335 660 MobiDBLite consensus disorder prediction 621 660 - -
Tan09g1335 660 FunFam Probable inactive receptor kinase RLK902 31 189 - -
Tan09g1335 660 PANTHER OS05G0588300 PROTEIN 16 627 IPR050994 -
Tan09g1335 660 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515(InterPro)
Tan09g1335 660 Pfam Leucine Rich Repeat 192 213 IPR001611 GO:0005515(InterPro)
Tan09g1335 660 Pfam Protein tyrosine and serine/threonine kinase 356 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1335 660 MobiDBLite consensus disorder prediction 299 324 - -
Tan09g1335 660 Gene3D Transferase(Phosphotransferase) domain 1 427 633 - -
Tan09g1335 660 Pfam Leucine rich repeat 89 133 IPR001611 GO:0005515(InterPro)
Tan09g1335 660 Gene3D Ribonuclease Inhibitor 190 236 IPR032675 -
Tan09g1335 660 MobiDBLite consensus disorder prediction 621 637 - -
Tan09g1335 660 MobiDBLite consensus disorder prediction 297 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1788 Tan-Chr8:69872201 Tan09g1335 Tan-Chr9:65636570 5.90E-86 dispersed
Tan08g2186 Tan-Chr8:73573738 Tan09g1335 Tan-Chr9:65636570 3.40E-70 dispersed
Tan09g1335 Tan-Chr9:65636570 Tan11g1423 Tan-Chr11:12810938 5.00E-90 dispersed
Tan03g1944 Tan-Chr3:74597955 Tan09g1335 Tan-Chr9:65636570 1.00E-41 transposed
Tan05g2711 Tan-Chr5:78988672 Tan09g1335 Tan-Chr9:65636570 1.00E-47 transposed
Tan06g1322 Tan-Chr6:16002114 Tan09g1335 Tan-Chr9:65636570 2.70E-54 transposed
Tan07g0188 Tan-Chr7:4460464 Tan09g1335 Tan-Chr9:65636570 6.30E-33 transposed
Tan09g0936 Tan-Chr9:61392219 Tan09g1335 Tan-Chr9:65636570 2.10E-39 transposed
Tan08g0198 Tan-Chr8:1771376 Tan09g1335 Tan-Chr9:65636570 1.40E-214 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68055 PF00069 Pkinase 1.00E-35 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1335 - - - 0.0