Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1338 ATGGCGTCGACTGAACTGAGTTTGGAATGTAAAGTTCAAAGTTATTCAATGTTGCTTAAATATTCGTTTGGAGATCAACAGCAATTAGCGGCTAATTGTGATCAGTCCTATGATAAGCTTAAGGAATTCGTTTCTCGCCTTGAAGAAGAGCGCCTCAAAATTGATGTCTTCAAACGGGAGCTTCCGCTTTGCATGCAGCTTTTAACTAACGCGGTAGAGACGTCGAGGAGACAGCTACAAGCCTGCAAGACAATAGAAGCGGCGGCGGCGGCGCCACCGAAGCCAGTTTTAGAAGAATTCATGCCGCTGAAAAACTCAACGCCGGCGGATCAGGATGAAAAGCCACTGACAATAATGTCCGATAAGGCAAACTGGATGACGTCAGTTCAGCTTTGGAGTCAAGCTACAAACGACGTAACTAAACACCAATTTCCGCCAAATAATGAATCTACTGTTCCAGACTCCAAATTTAATAATAATAATAATAATCCAGACACCGGTAACCAAAGAATTAATAATGGAGCTTTTGTTCCGTTCAACAAAGATCGGAGCTCCGGCCCGGGGTTGGGTCTTGGCGGCGAGAAAGGGGCGGCGGCGGCGGAAATGGAGTTATTGGAGAAAGGTGAGAAGAAGAAGATTAATTGTGGTGATAATAATAATAATATTAATGGTGGGGTGGTAATGGCGGCGGAGCAAAGGGCTCAAAATGGAGCGGCGGATGGGGGATTAGCTCCCACGACGAGTTCTTCTGCGACTCAGGCTCACCGGAAGGCCAGACGGTGCTGGTCGCCGGACTTGCACCGGAGATTTGTCAATGCTCTTCAGATGCTCGGTGGTTCCCAAGTTGCGACGCCAAAGCAGATTAGAGAGTTGATGAAAGTAGACGGTTTGACGAACGATGAAGTAAAAAGCCATCTCCAGAAATACCGGCTCCACACGATCAGACGGCCCGGTCCAAGCCAACAAGCATCTGGACCGCCAGCGGCTCAGCTCGTGGTACTCGGTCTAGGTGGGCTGTGGGTCCCACCAGAGTATGCGGCGGCGCCGCCCGCTCTGTACGGCCCACCGGCCACGCCTCACCCACCTTCCCACTTCTACAGCCCGCCTTCACTGCCGCAAGAATTTTATACAAGAACGACGGCGCCGCCGCATCTGCAGCACCATCATCATCAGGTGCAGTTATACAAGGGGGCGGCGGCGCAAAGCTCGCCGGAATCGGAGGTGAGGGACACGGCGGGGCGGTCGGAAAGCTTCGAGGAGGAGAAATCGGGGAGCAGTAGCTGGAGAATTGAGGGCGGCGAAAATGGTGATGACAGAAGAGTTAATAGTAGAGGATCATGCGGGCGGAGATCGGAAGAGGGTGAAGAAAGTAATAGAAGTGAAATTAGTCTGAAATTCTGA 1401 51.03 MASTELSLECKVQSYSMLLKYSFGDQQQLAANCDQSYDKLKEFVSRLEEERLKIDVFKRELPLCMQLLTNAVETSRRQLQACKTIEAAAAAPPKPVLEEFMPLKNSTPADQDEKPLTIMSDKANWMTSVQLWSQATNDVTKHQFPPNNESTVPDSKFNNNNNNPDTGNQRINNGAFVPFNKDRSSGPGLGLGGEKGAAAAEMELLEKGEKKKINCGDNNNNINGGVVMAAEQRAQNGAADGGLAPTTSSSATQAHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTIRRPGPSQQASGPPAAQLVVLGLGGLWVPPEYAAAPPALYGPPATPHPPSHFYSPPSLPQEFYTRTTAPPHLQHHHHQVQLYKGAAAQSSPESEVRDTAGRSESFEEEKSGSSSWRIEGGENGDDRRVNSRGSCGRRSEEGEESNRSEISLKF 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65679477 65682821 + Tan0010709.1 Tan09g1338 763681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1338 466 Pfam Myb-like DNA-binding domain 259 310 IPR001005 -
Tan09g1338 466 Coils Coil 40 60 - -
Tan09g1338 466 FunFam Myb family transcription factor 256 314 - -
Tan09g1338 466 MobiDBLite consensus disorder prediction 383 466 - -
Tan09g1338 466 Gene3D - 256 313 - -
Tan09g1338 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 314 IPR017930 -
Tan09g1338 466 NCBIfam myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677(InterPro)
Tan09g1338 466 MobiDBLite consensus disorder prediction 409 466 - -
Tan09g1338 466 MobiDBLite consensus disorder prediction 143 168 - -
Tan09g1338 466 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 30 425 IPR044787 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan09g1338 466 SUPERFAMILY Homeodomain-like 255 312 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1338 Tan-Chr9:65679477 Tan11g1867 Tan-Chr11:24114385 3.40E-40 dispersed
Tan08g0199 Tan-Chr8:1793984 Tan09g1338 Tan-Chr9:65679477 1.40E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28348 PF00249 Myb_DNA-binding 1.00E-05 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1338 - - - 0.0