Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1338 | ATGGCGTCGACTGAACTGAGTTTGGAATGTAAAGTTCAAAGTTATTCAATGTTGCTTAAATATTCGTTTGGAGATCAACAGCAATTAGCGGCTAATTGTGATCAGTCCTATGATAAGCTTAAGGAATTCGTTTCTCGCCTTGAAGAAGAGCGCCTCAAAATTGATGTCTTCAAACGGGAGCTTCCGCTTTGCATGCAGCTTTTAACTAACGCGGTAGAGACGTCGAGGAGACAGCTACAAGCCTGCAAGACAATAGAAGCGGCGGCGGCGGCGCCACCGAAGCCAGTTTTAGAAGAATTCATGCCGCTGAAAAACTCAACGCCGGCGGATCAGGATGAAAAGCCACTGACAATAATGTCCGATAAGGCAAACTGGATGACGTCAGTTCAGCTTTGGAGTCAAGCTACAAACGACGTAACTAAACACCAATTTCCGCCAAATAATGAATCTACTGTTCCAGACTCCAAATTTAATAATAATAATAATAATCCAGACACCGGTAACCAAAGAATTAATAATGGAGCTTTTGTTCCGTTCAACAAAGATCGGAGCTCCGGCCCGGGGTTGGGTCTTGGCGGCGAGAAAGGGGCGGCGGCGGCGGAAATGGAGTTATTGGAGAAAGGTGAGAAGAAGAAGATTAATTGTGGTGATAATAATAATAATATTAATGGTGGGGTGGTAATGGCGGCGGAGCAAAGGGCTCAAAATGGAGCGGCGGATGGGGGATTAGCTCCCACGACGAGTTCTTCTGCGACTCAGGCTCACCGGAAGGCCAGACGGTGCTGGTCGCCGGACTTGCACCGGAGATTTGTCAATGCTCTTCAGATGCTCGGTGGTTCCCAAGTTGCGACGCCAAAGCAGATTAGAGAGTTGATGAAAGTAGACGGTTTGACGAACGATGAAGTAAAAAGCCATCTCCAGAAATACCGGCTCCACACGATCAGACGGCCCGGTCCAAGCCAACAAGCATCTGGACCGCCAGCGGCTCAGCTCGTGGTACTCGGTCTAGGTGGGCTGTGGGTCCCACCAGAGTATGCGGCGGCGCCGCCCGCTCTGTACGGCCCACCGGCCACGCCTCACCCACCTTCCCACTTCTACAGCCCGCCTTCACTGCCGCAAGAATTTTATACAAGAACGACGGCGCCGCCGCATCTGCAGCACCATCATCATCAGGTGCAGTTATACAAGGGGGCGGCGGCGCAAAGCTCGCCGGAATCGGAGGTGAGGGACACGGCGGGGCGGTCGGAAAGCTTCGAGGAGGAGAAATCGGGGAGCAGTAGCTGGAGAATTGAGGGCGGCGAAAATGGTGATGACAGAAGAGTTAATAGTAGAGGATCATGCGGGCGGAGATCGGAAGAGGGTGAAGAAAGTAATAGAAGTGAAATTAGTCTGAAATTCTGA | 1401 | 51.03 | MASTELSLECKVQSYSMLLKYSFGDQQQLAANCDQSYDKLKEFVSRLEEERLKIDVFKRELPLCMQLLTNAVETSRRQLQACKTIEAAAAAPPKPVLEEFMPLKNSTPADQDEKPLTIMSDKANWMTSVQLWSQATNDVTKHQFPPNNESTVPDSKFNNNNNNPDTGNQRINNGAFVPFNKDRSSGPGLGLGGEKGAAAAEMELLEKGEKKKINCGDNNNNINGGVVMAAEQRAQNGAADGGLAPTTSSSATQAHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTIRRPGPSQQASGPPAAQLVVLGLGGLWVPPEYAAAPPALYGPPATPHPPSHFYSPPSLPQEFYTRTTAPPHLQHHHHQVQLYKGAAAQSSPESEVRDTAGRSESFEEEKSGSSSWRIEGGENGDDRRVNSRGSCGRRSEEGEESNRSEISLKF | 466 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 65679477 | 65682821 | + | Tan0010709.1 | Tan09g1338 | 763681 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1338 | 466 | Pfam | Myb-like DNA-binding domain | 259 | 310 | IPR001005 | - | |
Tan09g1338 | 466 | Coils | Coil | 40 | 60 | - | - | |
Tan09g1338 | 466 | FunFam | Myb family transcription factor | 256 | 314 | - | - | |
Tan09g1338 | 466 | MobiDBLite | consensus disorder prediction | 383 | 466 | - | - | |
Tan09g1338 | 466 | Gene3D | - | 256 | 313 | - | - | |
Tan09g1338 | 466 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 254 | 314 | IPR017930 | - | |
Tan09g1338 | 466 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 257 | 312 | IPR006447 | GO:0003677(InterPro) | |
Tan09g1338 | 466 | MobiDBLite | consensus disorder prediction | 409 | 466 | - | - | |
Tan09g1338 | 466 | MobiDBLite | consensus disorder prediction | 143 | 168 | - | - | |
Tan09g1338 | 466 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 30 | 425 | IPR044787 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1338 | 466 | SUPERFAMILY | Homeodomain-like | 255 | 312 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g1338 | Tan-Chr9:65679477 | Tan11g1867 | Tan-Chr11:24114385 | 3.40E-40 | dispersed | |
Tan08g0199 | Tan-Chr8:1793984 | Tan09g1338 | Tan-Chr9:65679477 | 1.40E-81 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28348 | PF00249 | Myb_DNA-binding | 1.00E-05 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1338 | - | - | - | 0.0 |