Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1339 ATGAGTCTCTCTGTGTTAACAGAAAAAAGAAAAATGCCCTACATGCAAATGGAGCCAGAGGAGAAACATGTGATACCAGCTTCTCAAATGGTGTTGAAATCCCTACATGGCTCAAAGGATGGTGAGAAGACTAGTTTATGGAAAAGGAAAGGAAAAAGGAGAGCAAAAGGACCTGCCATGGAAGGACTAAAGCAAGAGGAGCTTGATCCAAATCTAGAGTTTCCCTCTTCTTCTTCCTGCAAAAGCTTAACATTCCCAAGAAGGCCAGACTTCGGCCAGCTAGGGACTAAATGCTTGGTTAAGGCCAACCACTTCCTAGCAAAAATACCTGAATCAGACATAAGCCATTATGATGTTAAGATAACCCCAGAAGTTACTTCTCGCAAAATGAAGAAGAATATACTCACCGAGTTGGTCAAACATTATAGAAGCACAGAGCTGGGGATGCGACTGCCAGTTTATGATGGAGGAAGCAACCTGTACGCGGCCGGATTGCTGCCTTTCACATCAAAAGAGTTCACTGTCATTTTGGCTGATGAGGAAGAGGGGGCAGCCACTCCCAGGGAACGAGAATTTAGAGTACAAATAAAGTTTGTAACTTTGGCTAGCATGCACCAGTTACGAGAATTACTTGCTGGTAAACAAGTTAACAACCCTCAGGAAGCTTTGACCATTATTGACATCGTCTTGAGGGAGCTTCATGCTCAAAGATATATATCAGTTGGGCGATTCTTTTACTCTCCTTGCATTAAGAAACCACAGCATGTTGGGGGTGGTTTGCAAGCATGGCGTGGCTTCTATCAAAGCATCCGACCTACTCAAATGGGATTGTCACTAAACATTGACATGTCATCCACTGCATTCATTGAAGCAATCCCCGTCATTGATTTTGTCGCTCAAATTTTGAACAAAGATGTGTATTCAAGACCATTGTCCGATGCTGATCGGATCAAGGTTAAAAAAGTACTTAGAGGTGTAAAAGTTGAAGTTACACACAGAGGAAATGTACGAAGGAAATATCGGATTTCAGGACTAACATCACAGCCTACAAGAGAGCTAATTTTCCCTCTTGATGAGCAGATGAACATGAAATCTGTAGTTGAGTACTTCCAAGAGATGTATGGATATACCATTCAGTATACACATTTACCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATTTACCCATGGAGGCATGTAAGATACTTAAAGGACAGAGATACACGAAAGGACTGAATGAAAAGCAAATAACTTCCTTGTTGAAGGTTTCATGCCAAAGACCATCTGATCAAGAAATGGACATTTTACAGACTGTTCATCAGAATGCATATGAGGAAGATCCATACGCGCAAGAGTTTGGAATCAGCATCGACAGCAAGCTTACATCAGTTGAAGCACGAGTCCTTCCATCTCCATGGCTAAAGTTTCATGACACGGGAAAAGAGAAGGAACATCTGCCTCAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTAATAAATGGAAGTGTTGTAAGATACTGGGCTTGTATCAATTTCTCACGCAACGTCCAAGAGAGCATAGCTCGTGGTTTCTGTCAACAGCTGGTCCAGATGTGCCAAATCTCTGGCATGGAATTTAACCCAGATCCTGCAATTCCTGTATACTCAGCAAGACCAGATCAAGTGAAGAAGGCCTTAAAATTTGTATATACTGCAGTTTATAACAAACATGAAGGGAAAGAGTTAGAGTTACTGATAGCTATTCTTCCCGACAACAATGGCTCTTTATACGGTGATCTTAAAAGGATCTGTGAAACAGAGTTGGGATTGATATCCCAGTGTTGTCTAACAAAGCACGTCTTCAAGAAGAGCAGACAGTACTTGGCGAATGTGTCACTTAAGATCAACGTCAAGATGGGTGGAAGAAACACTGTTCTATTAGATGCTTTGCGGTCAAGAATTCCACTAGTCAGTGACATACCAACAATAATCTTTGGAGCTGATGTCACCCATCCAGAATCTGGAGAGGATTCTCTTCCATCAATAGCTGCCGTTGTGGCTTCCCAAGATTGGCCAGAAGTTTCAAAATATGCTGGATTGGTTTGTGCTCAGCCTCACCGAGAAGAACTGATTCAAGATTTATTCAAAACATGGAAAGATCCTCATCGAGGCACGGTTGCTGGGGGCATGATAAGGGAGCTCTTGCTTTCATTTAAGAAGGCCACTGGACAAAAACCATTAAGGATCATATTCTACAGGGATGGTGTCAGTGAGGGTCAGTTCTACCAGGTTCTACTGCACGAACTTGATGCCATACGAAAGGCTTGTGCTTCACTAGAATCAAGTTACCAACCTCCAGTAACTTTTATCATTGTCCAAAAGCGACACCATACCAGACTTTTTGCATCCAATCACAATGATAGGAGTAGCACTGACAAGAGTGGTAATATTTTACCAGGTACTGTCGTGGATTCAAAGATATGTCATCCAACTGAGTTCGACTTTTATCTATGCAGTCACGCAGGAATCCAGGGTACGAGTCGTCCCGCCCATTATCATGTTCTTTGGGATGAGAACAATTTCAGTGCTGATGACATTCAATCTCTGACTAATAACCTCTGTTACACGTATGCGCGGTGCACAAGATCAGTCTCAGTAGTGCCTCCAGCATACTACGCTCATTTAGCAGCGTACAGAGCTCGATTCTACGTGGAACCCGACGCCCAGGAGAATGCCAAAAGGTGCTGCACTCGAACCACAAATGGGTCCTGCGTCCGGCCTCTGCCTGCACTGAAAGAGAGAGTGAAAAATGTAATGTTCTATTGTTGA 2817 42.78 MSLSVLTEKRKMPYMQMEPEEKHVIPASQMVLKSLHGSKDGEKTSLWKRKGKRRAKGPAMEGLKQEELDPNLEFPSSSSCKSLTFPRRPDFGQLGTKCLVKANHFLAKIPESDISHYDVKITPEVTSRKMKKNILTELVKHYRSTELGMRLPVYDGGSNLYAAGLLPFTSKEFTVILADEEEGAATPREREFRVQIKFVTLASMHQLRELLAGKQVNNPQEALTIIDIVLRELHAQRYISVGRFFYSPCIKKPQHVGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQILNKDVYSRPLSDADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQEMYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEMDILQTVHQNAYEEDPYAQEFGISIDSKLTSVEARVLPSPWLKFHDTGKEKEHLPQVGQWNMMNKKVINGSVVRYWACINFSRNVQESIARGFCQQLVQMCQISGMEFNPDPAIPVYSARPDQVKKALKFVYTAVYNKHEGKELELLIAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRSRIPLVSDIPTIIFGADVTHPESGEDSLPSIAAVVASQDWPEVSKYAGLVCAQPHREELIQDLFKTWKDPHRGTVAGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLHELDAIRKACASLESSYQPPVTFIIVQKRHHTRLFASNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADDIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVEPDAQENAKRCCTRTTNGSCVRPLPALKERVKNVMFYC 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65705767 65715375 + Tan0002929.1 Tan09g1339 763682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1339 938 Pfam Piwi domain 581 899 IPR003165 GO:0003676(InterPro)
Tan09g1339 938 Gene3D - 649 938 IPR036397 GO:0003676(InterPro)
Tan09g1339 938 ProSiteProfiles Piwi domain profile. 580 901 IPR003165 GO:0003676(InterPro)
Tan09g1339 938 Gene3D paz domain 285 410 - -
Tan09g1339 938 FunFam protein argonaute 10-like 649 938 - -
Tan09g1339 938 Pfam Argonaute linker 2 domain 435 478 IPR032472 -
Tan09g1339 938 CDD Piwi_ago-like 450 899 IPR045246 -
Tan09g1339 938 SUPERFAMILY Ribonuclease H-like 569 902 IPR012337 -
Tan09g1339 938 FunFam Argonaute 10 470 643 - -
Tan09g1339 938 Gene3D - 470 643 - -
Tan09g1339 938 SMART Piwi_a_2 580 901 IPR003165 GO:0003676(InterPro)
Tan09g1339 938 Pfam Mid domain of argonaute 489 566 IPR032473 -
Tan09g1339 938 SMART DUF1785_2 239 291 IPR014811 -
Tan09g1339 938 ProSiteProfiles PAZ domain profile. 293 406 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Tan09g1339 938 MobiDBLite consensus disorder prediction 34 61 - -
Tan09g1339 938 FunFam Protein argonaute-2 285 411 - -
Tan09g1339 938 Pfam PAZ domain 296 422 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Tan09g1339 938 Pfam Argonaute linker 1 domain 240 290 IPR014811 -
Tan09g1339 938 CDD PAZ_argonaute_like 291 405 - -
Tan09g1339 938 SMART PAZ_2_a_3 296 428 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Tan09g1339 938 SUPERFAMILY PAZ domain 286 446 IPR036085 GO:0005515(InterPro)
Tan09g1339 938 Pfam N-terminal domain of argonaute 97 230 IPR032474 -
Tan09g1339 938 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 88 907 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1339 Tan-Chr9:65705767 Tan09g1341 Tan-Chr9:65709431 0.00E+00 dispersed
Tan09g1339 Tan-Chr9:65705767 Tan09g1340 Tan-Chr9:65709431 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1339 K11593 - csv:101213206 1770.75