Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1381 ATGGAGGATAAGAGAGCCAACATACTTTTTCTTTTGTTAATCGTCTTCCTCATCATTATCGTCATTCTTGCTCGAATTTTCCTGAAACTTACCAACGCTTTCTTTCTTATTTGCGGCATCGATGTGTCCCTCACCGCCGCTATCTTGGTGTATATGATAATCAGAATGCGATACAACCAGAGAAGAAGACAGCTCGAGTCGCAGTTAGTTTCGGAAGGTCGAGAGCTTCGGATCGAGTACAGTTTCTTAAGAAAAGTCGCCGGAGTCCCGACGAAGTTCCGGTACAAAGAGATTGAGGAAGCGACGGACTATTTCAGGGCGTTGATAGGTCAAGGATCGTCCGGTTCCGTCTTCAAAGGAATCCTCAAAGACGGCACTGCGGTGGCCGTCAAGCGGATCGAGGGCGAGAATCGAGGAGAGAAAGAGTTCCGAGCGGAGGTATCCGCCATTGCTAGTGTTCAGCATATTAATCTTGTTCGTCTAATTGGCTATTGTACGAATTCATCTGGACCTCGATTTCTCGTCTACGAATTCGTTTCGAACGGATCCTTGGATTGCTGGATTTTCCCCAAAAAACCTAGGCACAAGAATCGAAATCGCCCTGGCGGTTGCTTAACTTGGGATCTGAGATACAGAGTCGCAATTGATGTAGCCAAAGCCCTAGCGTACCTTCACCACGATTGCCGATCGAGAATCTTACACCTCGACGTGAAGCCGGAGAATATCCTCCTCGACGAAAACTACAGAGCGATCGTATCGGATTTCGGACTGTCGAAGCTGATGGGGAAAGACGAGAGCCGAATAATGGCGTCGATGAGAGGGACGAAGGGATATTTGGCTCCGGAATGGTTATTGGAGAACGGAATTTCAGAGAAATCGGACATATTCAGCTACGGAATGGTTCTTCTGGAACTTGTCGGAGGGCAGAGGAACGTGAGTGTCGTTGAAAACGGCGAGGACAAATCTAAGAGGAAATGGCAGTATTTCCCCCGAATCGTGAGTGCGAAGATGAGGGAAGGGAAATTAATGGAAGCTGTGGATCGAAGACTGTTGGAAACGGGAACGATTGACGAGAGAGAGGTACGGAAACTGGTTTGTGTGGGTTTGTGGTGCATTCAAGAGAAGGCGAATCTGAGGCCGACGATGGCGACAGTGGTGGATATGCTCGAAGGCCGCGTCGCGGTGGAGGAGCCGCCGGACACTCAAATGCTCGTCGTTGATTTGTTGTCCATTGATGAAGAGATGATGAATAGCCATGAGAGGCCGAAGATCGCTGCATTTGGGGAACGGATGAACGACAGAGACCTTCCTTCCTCGTCGACGACGTACTCCTATGCGTTTTCGGTACTCTCCGCCCGATGA 1362 49.27 MEDKRANILFLLLIVFLIIIVILARIFLKLTNAFFLICGIDVSLTAAILVYMIIRMRYNQRRRQLESQLVSEGRELRIEYSFLRKVAGVPTKFRYKEIEEATDYFRALIGQGSSGSVFKGILKDGTAVAVKRIEGENRGEKEFRAEVSAIASVQHINLVRLIGYCTNSSGPRFLVYEFVSNGSLDCWIFPKKPRHKNRNRPGGCLTWDLRYRVAIDVAKALAYLHHDCRSRILHLDVKPENILLDENYRAIVSDFGLSKLMGKDESRIMASMRGTKGYLAPEWLLENGISEKSDIFSYGMVLLELVGGQRNVSVVENGEDKSKRKWQYFPRIVSAKMREGKLMEAVDRRLLETGTIDEREVRKLVCVGLWCIQEKANLRPTMATVVDMLEGRVAVEEPPDTQMLVVDLLSIDEEMMNSHERPKIAAFGERMNDRDLPSSSTTYSYAFSVLSAR 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65956054 65957932 - Tan0020804.1 Tan09g1381 763724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1381 453 SMART serkin_6 103 389 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1381 453 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524(InterPro)
Tan09g1381 453 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Tan09g1381 453 PANTHER OS07G0415500 PROTEIN 7 405 - -
Tan09g1381 453 Pfam Protein kinase domain 108 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1381 453 Gene3D Transferase(Phosphotransferase) domain 1 179 404 - -
Tan09g1381 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1381 453 FunFam Putative receptor-like protein kinase 179 397 - -
Tan09g1381 453 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1381 453 SUPERFAMILY Protein kinase-like (PK-like) 85 390 IPR011009 -
Tan09g1381 453 FunFam Putative receptor-like protein kinase 70 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1381 Tan-Chr9:65956054 Tan11g1068 Tan-Chr11:8382353 8.80E-78 dispersed
Tan09g1381 Tan-Chr9:65956054 Tan02g2725 Tan-Chr2:95532225 1.80E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68056 PF00069 Pkinase 6.40E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1381 - - - 0.0