Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1393 ATGGAGAGCCTCAGAAACAGAGGGGGTTTCAGGGTTTCTGTTTGTGGCCAAGAAGAGCTCGAGCAACTATCCAGAGATGGCAGCCAGTATAGCCTCACCACTGGAATATTGCCGTCTCTTGGCGCTAGAAGCAACCGGAGAGTTAAGCTTCGGCAGTTTATCATTTCCCCCTATGACCGTCGATACAGGATTTGGGAGACTTTTCTAGTTGTTTTGGTTGTTTATACTGCCTGGGTCTCGCCGTTCGAGTTTGGATTCCTTAAGAAACCCCAATCGCCACTCTCAATTACAGACAATGTGGTGAATGGATTTTTTGCTGTGGATATTATTCTCACATTCTTTGTAGCTTATCTTGACAAAGCCACCTATTTACTTGTTGATGAACCAAAGAAGATTGCTCTAAAGTATGCAAGTACATGGCTAATCTTTGATGTCATATCCACAATTCCTTCTGAACTTGCACACAAGATTTCACCTCCACCTCTCCGTTCTTATGGATTATTCAACATGCTTCGTCTATGGCGTCTCAGAAGAGTCAGTGCTCTCTTTTCCAGACTGGAAAAAGATAGGAACTATAACTACTTTTGGGTTCGATGTGCGAAACTCATTTGTGTTACTCTCTTTGCGGTTCATTGTGCTGCATGCTTCTATTATCTTATTGCTGCTCGCTATCATGACCCGAAAAGGACGTGGATTGGAGCATCAATGGAAAACTTTCTTGAGCAAAGTTTGGGGATTAGATATGTCACTTCCATTTACTGGTCCATCACTACCCTAACCACTGTCGGCTATGGTGACTTGCATCCTGTGAATACAAGAGAGATGCTTTTTGACATCTTCTACATGCTTTTCAATCTTGGTTTGACAGCATACTTGATTGGAAATATGACCAACTTAGTTGTCCATGGGACCAGTAGAACTAGAAAATTTAGAGATACCATACAAGCGGCTTCAAGTTTTGCCCATAGGAATCAACTTCCTCCCCGTTTGCAAGACCAAATGCTTGCACATTTGTGTCTAAAGTTCAGAACCGACTCTGAAGGATTGCAGCAGCAAGAAACTCTCGACTCCTTGCCTAAAGCCATCCGATCAAGCATTTCACATTATCTTTTCTATTCTTTAGTTGACAAGGTCTACTTGTTTCGTGGTGTTTCAAATGACCTACTTTTTCAACTGGTTTCAGAAATGAAGGCAGAGTATTTTCCTCCAAAAGAAGATGTGATTTTACAAAATGAAGCCCCAACAGACTTCTACATTCTTGTCACGGGTGCTGTGGATTTGCTGGTTCTCAAGAATGGAGTTGAACAGGTTGTTGCAGAGGCTAAAACCGGTGAACTTTGTGGTGAGATTGGGGTGTTATGTTACAGGCCACAACTATTTACTGTGCGCACGAAGCGACTGAGTCAGTTGCTGCGTCTGAATCGTACCGCTTTCCTGAATATCGTCCAATCAAATGTCGGTGATGGGACCATAATCATGAACAATCTTCTTCAGCATTTGAGGGACCTCAAAGACAAGGACCCCATCATGGAAGGAGTTTTGTTGGAGACAGAGAACATGCTAGCTAGAGGCAGAATGGACCTACCACTCAGTCTTTGTTTTGCAACACTTAGAGGAGATGACTTGCTGTTACACCAGCTTTTGAAGCGAGGTCTTGATCCAAATGAATCCGACAACAATGGAAGGACTTCACTTCATATAGCAGCATCAAAAGGAAACGAGAATTGTGTGCTTCTATTACTCGACTATGGAGCGGATCCCAATAGTAGAGATTCTGATGGGATTGTGCCATTGTGGGAGGCGATACTAGGTGGCCATGAGCCAGTAGTTCAGCTACTTATAGACAATGGTGCTAATCTTCGATCAGGAGAGGTGGGTCACTTTGCGTGTACTGCTGCAGAGCAAAACAACCTCCAGTTGCTCAAGGAGATTCTCCGATATGGAGGAGACGTTACGAGTGCCAAGAACAATGGAACGACGGCTTTACATGTTGCTGTTTGTGAAGACAACATTGAGATTGTCAAGTTCCTTCTCAAACAAGGAGCTAATATTGACAAACCTGATGTTCATGGATGGACTCCAAGAGATCTAGCAGACCAACAGGGACATGAAGAAATTAAAAACCTCTTCCAGACAATGGAGTCAAAAACTCAATCTGTCGTCCCCATTCCCGATAAGCAGACTGGAATTCGCTTCCTTGGACGATTTACAAGCGAGCCTATGATTCGCCCTTTACCTCATGAAGTAAATGATGGATCATGGCCGGGTCAATCTCGTCCACGGCGTAAGACTAACAACTTCAATAACTCATTGTTTGGTATCATGTCAGCAGCACACTCAGGCGAGAAAGACATTCTTTTCCCTGATAACCAAACCAGAGGAGAGAACTCTGGAACCAATCCTGCAAGGGTGATAATCAGCTGTCCAGAGGTCGGCGAAGTTTCGGGGAAGTTGGTGCTGCTTCCAGGAAGCTTCAACGAGCTGCTTGAGATCGGTGCGAAGAAATATGGGATTATGGCTTCAAAGGTATTGAACAAAGATGGAGCTGTCATTGAAGATGTAGAGGTCATTAGGGATGGTGATCATCTTATTTTTGTTAGCGATGGAAGAACAATATAA 2619 43.68 MESLRNRGGFRVSVCGQEELEQLSRDGSQYSLTTGILPSLGARSNRRVKLRQFIISPYDRRYRIWETFLVVLVVYTAWVSPFEFGFLKKPQSPLSITDNVVNGFFAVDIILTFFVAYLDKATYLLVDEPKKIALKYASTWLIFDVISTIPSELAHKISPPPLRSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLICVTLFAVHCAACFYYLIAARYHDPKRTWIGASMENFLEQSLGIRYVTSIYWSITTLTTVGYGDLHPVNTREMLFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAHRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVAEAKTGELCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLNIVQSNVGDGTIIMNNLLQHLRDLKDKDPIMEGVLLETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGLDPNESDNNGRTSLHIAASKGNENCVLLLLDYGADPNSRDSDGIVPLWEAILGGHEPVVQLLIDNGANLRSGEVGHFACTAAEQNNLQLLKEILRYGGDVTSAKNNGTTALHVAVCEDNIEIVKFLLKQGANIDKPDVHGWTPRDLADQQGHEEIKNLFQTMESKTQSVVPIPDKQTGIRFLGRFTSEPMIRPLPHEVNDGSWPGQSRPRRKTNNFNNSLFGIMSAAHSGEKDILFPDNQTRGENSGTNPARVIISCPEVGEVSGKLVLLPGSFNELLEIGAKKYGIMASKVLNKDGAVIEDVEVIRDGDHLIFVSDGRTI 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 66065097 66070946 + Tan0002330.1 Tan09g1393 763736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1393 872 SMART cnmp_10 380 497 IPR000595 -
Tan09g1393 872 FunFam Potassium channel SKOR 63 301 - -
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 75 82 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1393 872 SUPERFAMILY Ankyrin repeat 531 711 IPR036770 -
Tan09g1393 872 Pfam Cyclic nucleotide-binding domain 399 485 IPR000595 -
Tan09g1393 872 Pfam Ion transport protein 62 307 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1393 872 PANTHER POTASSIUM CHANNEL AKT1 22 864 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Tan09g1393 872 Gene3D - 63 301 - -
Tan09g1393 872 MobiDBLite consensus disorder prediction 744 763 - -
Tan09g1393 872 Gene3D - 528 712 IPR036770 -
Tan09g1393 872 ProSiteProfiles KHA domain profile. 803 872 IPR021789 -
Tan09g1393 872 SUPERFAMILY Voltage-gated potassium channels 57 301 - -
Tan09g1393 872 CDD CAP_ED 380 485 IPR000595 -
Tan09g1393 872 ProSiteProfiles Ankyrin repeat profile. 560 592 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 PRINTS Ankyrin repeat signature 561 576 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 PRINTS Ankyrin repeat signature 673 687 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 Pfam Ankyrin repeats (3 copies) 532 620 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 Pfam Ankyrin repeats (3 copies) 631 706 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 Pfam KHA, dimerisation domain of potassium ion channel 803 865 IPR021789 -
Tan09g1393 872 ProSiteProfiles Ankyrin repeat region circular profile. 593 620 - -
Tan09g1393 872 ProSiteProfiles Ankyrin repeat region circular profile. 657 688 - -
Tan09g1393 872 SUPERFAMILY cAMP-binding domain-like 305 501 IPR018490 -
Tan09g1393 872 ProSiteProfiles cAMP/cGMP binding motif profile. 380 482 IPR000595 -
Tan09g1393 872 Gene3D Jelly Rolls 344 506 IPR014710 -
Tan09g1393 872 FunFam Potassium channel KAT2 368 504 - -
Tan09g1393 872 ProSiteProfiles Ankyrin repeat region circular profile. 560 591 - -
Tan09g1393 872 SMART ANK_2a 624 653 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 SMART ANK_2a 593 622 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 SMART ANK_2a 657 686 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 SMART ANK_2a 527 556 IPR002110 GO:0005515(InterPro)
Tan09g1393 872 SMART ANK_2a 560 589 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1393 Tan-Chr9:66065097 Tan11g1376 Tan-Chr11:12056734 2.20E-93 dispersed
Tan01g3696 Tan-Chr1:101780042 Tan09g1393 Tan-Chr9:66065097 1.60E-08 transposed
Tan05g2590 Tan-Chr5:77227450 Tan09g1393 Tan-Chr9:66065097 2.00E-06 transposed
Tan01g3670 Tan-Chr1:101564582 Tan09g1393 Tan-Chr9:66065097 8.60E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1393 K21867 - csv:101220784 1630.15