Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1395 ATGAAAGGGGAAGTACAATTGGTATCGTCCATTGCCCAAAACCCTAGTGACTCTGATCCTCTGCTTGAGAATCAGCCCGATTCATCCCATGGTGGAACCTCCCATGAAATCAAGGATGATGAGGATACTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGATGCTGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTGTTTCTAGCTGTCCAAACTTTAATAGCTGCAATGGGTGGTTACGCATATATTATGGACAAAGACGGGGCATTCAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCCAAACATCCTATTCCATTTTATTACTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTTGGGCTCATACTACATTGTTCCTCCCTGAATAGTAATGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTACGGATGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATTGTTTTTGTCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTAGTGGAGGATCTCCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAGCAACACTTGAAAATGCTACAGCTTCTGTAA 921 43.87 MKGEVQLVSSIAQNPSDSDPLLENQPDSSHGGTSHEIKDDEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 66071587 66075310 - Tan0021653.2 Tan09g1395 763738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1395 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 115 IPR013083 -
Tan09g1395 306 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 305 - -
Tan09g1395 306 MobiDBLite consensus disorder prediction 1 43 - -
Tan09g1395 306 ProSiteProfiles Zinc finger RING-CH-type profile. 43 108 IPR011016 GO:0008270(InterPro)
Tan09g1395 306 SUPERFAMILY RING/U-box 49 106 - -
Tan09g1395 306 CDD RING_CH-C4HC3_MARCH 51 102 - -
Tan09g1395 306 SMART ringv_2 50 102 IPR011016 GO:0008270(InterPro)
Tan09g1395 306 MobiDBLite consensus disorder prediction 7 31 - -
Tan09g1395 306 Pfam RING-variant domain 51 101 IPR011016 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1394 Tan-Chr9:66071587 Tan09g1395 Tan-Chr9:66071587 3.00E-178 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1395 - - - 0.0