Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1405 ATGGGGCAAAGAAAAGGCATGGGGTGGATTTTTGTGGCAATTCTAGCAATGGTTTTGGCAGTGAAATCTGATCAGCTGGCTGTTGGATTCTATTCAAAGTCATGTCCTAAAGCAGAGTCCATTGTTAGGTCCACTGTTGAGTCGTATTTCAAGGCTGATCCCACCATTGCAGCTGGCCTGCTGAGGCTTCACTTCCACGACTGTTTTGTTCAGGGGTGCGATGGCTCAGTATTGATAATGAGCGAAGAAGCAGAAATAAATGCAGGGCCAAACATGGGGTTAAGAGGGTTTGAAGTAGTTGATGATGCAAAAACGCAGCTCGAAAACTTGTGCCCTGGTGTGGTTTCTTGCGCAGATATACTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGTCCAAGCTGGTCAGTGCCGACTGGAAGAAGGGATGGGACAGTTTCAGTGAGTTTTTCGGCGGAAGATCTACCTTCTCCCTTCGAGCCCATCAATGTCCATATACAAAAGTTTGCAGAAAAAGGCCTTACTGTAGAAGATCTTGTAACCCTAGTTGGTGGTCACACGATCGGGCGAACAGATTGCCAACTATTCAGCTACCGTCTCCAAAACTTCACAAGCACAGGGAATCCAGACCCAACCATAAACCCATCGTTCTTGACACACCTGAGAGGCCTGTGCCCCTTAGATGGAGATCCGTTCAGAGGCGTGGCAATGGACAAAGACAGCCAGCTGAAATTTGACAACAGTTTCTTCAAGAACTTGATCAATGGCAATGGAGTTTTGGAGTCAGATCAGAGACTTTGGAGCCATCCTTCAACCAGAGGCATTGTGCAGAACTATGCTGGGAATTTAAGGGGATTGTTGGGCCTCAGATTTAACTATGAGTTTAAGAAAGCCATGGTTAAGTTGAGTAGCATTGATGTCAAGACTGGCACACAAGGGGAGATTAGAAAAGTGTGTTCCCAATTCAATAAGCAAAAGTAA 987 46.0 MGQRKGMGWIFVAILAMVLAVKSDQLAVGFYSKSCPKAESIVRSTVESYFKADPTIAAGLLRLHFHDCFVQGCDGSVLIMSEEAEINAGPNMGLRGFEVVDDAKTQLENLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGTVSVSFSAEDLPSPFEPINVHIQKFAEKGLTVEDLVTLVGGHTIGRTDCQLFSYRLQNFTSTGNPDPTINPSFLTHLRGLCPLDGDPFRGVAMDKDSQLKFDNSFFKNLINGNGVLESDQRLWSHPSTRGIVQNYAGNLRGLLGLRFNYEFKKAMVKLSSIDVKTGTQGEIRKVCSQFNKQK 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 66177062 66179533 - Tan0007938.1 Tan09g1405 763748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1405 328 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 Pfam Peroxidase 42 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Tan09g1405 328 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 FunFam Peroxidase 158 304 - -
Tan09g1405 328 Gene3D - 29 325 - -
Tan09g1405 328 PANTHER PEROXIDASE 25-RELATED 19 321 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan09g1405 328 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan09g1405 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan09g1405 328 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan09g1405 328 FunFam Peroxidase 29 167 - -
Tan09g1405 328 Gene3D Peroxidase, domain 2 158 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0052 Tan-Chr2:684767 Tan09g1405 Tan-Chr9:66177062 4.80E-61 dispersed
Tan02g1246 Tan-Chr2:32234625 Tan09g1405 Tan-Chr9:66177062 9.00E-96 dispersed
Tan02g1248 Tan-Chr2:32272016 Tan09g1405 Tan-Chr9:66177062 9.10E-109 dispersed
Tan02g1282 Tan-Chr2:35062624 Tan09g1405 Tan-Chr9:66177062 2.30E-75 dispersed
Tan05g1729 Tan-Chr5:53217442 Tan09g1405 Tan-Chr9:66177062 1.80E-64 dispersed
Tan06g1549 Tan-Chr6:23736421 Tan09g1405 Tan-Chr9:66177062 1.10E-53 dispersed
Tan09g1405 Tan-Chr9:66177062 Tan11g0147 Tan-Chr11:1382984 1.60E-65 dispersed
Tan09g1405 Tan-Chr9:66177062 Tan03g2030 Tan-Chr3:75315168 2.10E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1405 K00430 - csv:101214998 561.992