Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1415 ATGAAGCGACTGTCTAGAAAAGTTGGCAAGTATGAGGTAGGGCGGACCGTTGGCGAAGGAACCTTCGCCAAGGTTAAGTTTGCATGTAACACGGACACGGGGGACGGTGTGGCCATGAAAGTTTTGGCCAAAAGTAGCATTCTCAAGCACAGAATGGTAGAACAGATTAAGAGGGAGATATCAATAATGAAAATTGTCAGGCATCCACATATTGTCAGACTACATGAGGTGTTGGCTAGCCGGACAAAGATATATATTATTCTTGAGTTTGTCTCTGGAGGTGAACTGTATGATAAAATAGTTCTTCAGAAGAAACTTCCTGAAATTGAGTCTAGACAATACTTTCAACAACTGATAGATGCAGTTGCTCATTGTCACAGCAAGGGTGTGTACCACAGGGACCTTAAGCCTGAAAACCTTCTTCTTGATGCTGATGGAAATCTGAAGGTTTCTGACTTTGGACTGAGTGCGCTGTCTCGACAAGGCGTTGAGCTGCTTCACACCACATGTGGAACTCCTAATTATGTTGCACCTGAGGTTCTTGGAGGTCAGGGTTATGATGGTGCAGCTGCAGATATATGGTCATGTGGAGTCATCCTCTATGTACTAATGGCTGGATATCTTCCATTTTCAGAGGCAGATCTCCCCACCCTAAACAAGAAGATAAATGCAGCAGAGTATTCCTGCCCCTATTGGTTTTCACCTGGTGCAAAGTTGTTGATTCAAAAGATCCTTGATCCAAATCCTAAAACTAGGATTCGAATTGAAGAAATTAGAAAAGATCCATGGTTCAGACGAAGCTACGTCCCTGCTAAACTAGGAAAAGATGAGGAAGTAAACTTAGATGATGTTCAGGCTGTATTTGATGACATTGAGGAAGAATATGTAGCTGATCATTCAGAAAAAAGTGACGATGGTCCTTTAATAATGAATGCATTTGAGATGATAACATTATCTCAAGGATTAAATCTGTCACCATTATTTGATCGGGGACAGGACTATATAAAACGGCAAACACGTTTTGTTTCTCGTAAACCTGCTAACTTCATAATGTCTGCCATTGAAGTTGTAGCAGAAGCAATGGCTTTAAATGTCCACACACGTAATTTCAAGACAAGGCTGGAAAGAAGGACTGGACACCGGGTTGGACAGTTTGCAGCTGTACTGGAGATTTATGAAGTGGCGCCATCACTTTTTATGGTGGACGTTCGCAAAGCTGCTGGAGATACTCTAGAATATCACAAGTTCTACAAGAATTTCTGTGCTAAGCTAGAAAACATAATCTGGAAACCATCCGAGAGTGTGGGGAACTGA 1314 42.01 MKRLSRKVGKYEVGRTVGEGTFAKVKFACNTDTGDGVAMKVLAKSSILKHRMVEQIKREISIMKIVRHPHIVRLHEVLASRTKIYIILEFVSGGELYDKIVLQKKLPEIESRQYFQQLIDAVAHCHSKGVYHRDLKPENLLLDADGNLKVSDFGLSALSRQGVELLHTTCGTPNYVAPEVLGGQGYDGAAADIWSCGVILYVLMAGYLPFSEADLPTLNKKINAAEYSCPYWFSPGAKLLIQKILDPNPKTRIRIEEIRKDPWFRRSYVPAKLGKDEEVNLDDVQAVFDDIEEEYVADHSEKSDDGPLIMNAFEMITLSQGLNLSPLFDRGQDYIKRQTRFVSRKPANFIMSAIEVVAEAMALNVHTRNFKTRLERRTGHRVGQFAAVLEIYEVAPSLFMVDVRKAAGDTLEYHKFYKNFCAKLENIIWKPSESVGN 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 66275846 66280351 - Tan0016757.1 Tan09g1415 763758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1415 437 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Tan09g1415 437 CDD CIPK_C 311 426 - -
Tan09g1415 437 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165(InterPro)
Tan09g1415 437 SUPERFAMILY Protein kinase-like (PK-like) 8 289 IPR011009 -
Tan09g1415 437 Pfam NAF domain 307 366 IPR004041 GO:0007165(InterPro)
Tan09g1415 437 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 415 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan09g1415 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1415 437 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Tan09g1415 437 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1415 437 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Tan09g1415 437 SMART serkin_6 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1415 437 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Tan09g1415 437 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1415 437 FunFam Non-specific serine/threonine protein kinase 4 305 - -
Tan09g1415 437 Gene3D Kinase associated domain 1, KA1 304 430 - -
Tan09g1415 437 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2506 Tan-Chr2:93633492 Tan09g1415 Tan-Chr9:66275846 1.40E-168 dispersed
Tan07g1149 Tan-Chr7:40503015 Tan09g1415 Tan-Chr9:66275846 1.10E-59 dispersed
Tan09g1415 Tan-Chr9:66275846 Tan10g0068 Tan-Chr10:1022351 2.70E-140 dispersed
Tan09g1415 Tan-Chr9:66275846 Tan05g2668 Tan-Chr5:78077264 2.10E-145 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68057 PF00069 Pkinase 9.50E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1415 - - - 0.0