Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1415 | ATGAAGCGACTGTCTAGAAAAGTTGGCAAGTATGAGGTAGGGCGGACCGTTGGCGAAGGAACCTTCGCCAAGGTTAAGTTTGCATGTAACACGGACACGGGGGACGGTGTGGCCATGAAAGTTTTGGCCAAAAGTAGCATTCTCAAGCACAGAATGGTAGAACAGATTAAGAGGGAGATATCAATAATGAAAATTGTCAGGCATCCACATATTGTCAGACTACATGAGGTGTTGGCTAGCCGGACAAAGATATATATTATTCTTGAGTTTGTCTCTGGAGGTGAACTGTATGATAAAATAGTTCTTCAGAAGAAACTTCCTGAAATTGAGTCTAGACAATACTTTCAACAACTGATAGATGCAGTTGCTCATTGTCACAGCAAGGGTGTGTACCACAGGGACCTTAAGCCTGAAAACCTTCTTCTTGATGCTGATGGAAATCTGAAGGTTTCTGACTTTGGACTGAGTGCGCTGTCTCGACAAGGCGTTGAGCTGCTTCACACCACATGTGGAACTCCTAATTATGTTGCACCTGAGGTTCTTGGAGGTCAGGGTTATGATGGTGCAGCTGCAGATATATGGTCATGTGGAGTCATCCTCTATGTACTAATGGCTGGATATCTTCCATTTTCAGAGGCAGATCTCCCCACCCTAAACAAGAAGATAAATGCAGCAGAGTATTCCTGCCCCTATTGGTTTTCACCTGGTGCAAAGTTGTTGATTCAAAAGATCCTTGATCCAAATCCTAAAACTAGGATTCGAATTGAAGAAATTAGAAAAGATCCATGGTTCAGACGAAGCTACGTCCCTGCTAAACTAGGAAAAGATGAGGAAGTAAACTTAGATGATGTTCAGGCTGTATTTGATGACATTGAGGAAGAATATGTAGCTGATCATTCAGAAAAAAGTGACGATGGTCCTTTAATAATGAATGCATTTGAGATGATAACATTATCTCAAGGATTAAATCTGTCACCATTATTTGATCGGGGACAGGACTATATAAAACGGCAAACACGTTTTGTTTCTCGTAAACCTGCTAACTTCATAATGTCTGCCATTGAAGTTGTAGCAGAAGCAATGGCTTTAAATGTCCACACACGTAATTTCAAGACAAGGCTGGAAAGAAGGACTGGACACCGGGTTGGACAGTTTGCAGCTGTACTGGAGATTTATGAAGTGGCGCCATCACTTTTTATGGTGGACGTTCGCAAAGCTGCTGGAGATACTCTAGAATATCACAAGTTCTACAAGAATTTCTGTGCTAAGCTAGAAAACATAATCTGGAAACCATCCGAGAGTGTGGGGAACTGA | 1314 | 42.01 | MKRLSRKVGKYEVGRTVGEGTFAKVKFACNTDTGDGVAMKVLAKSSILKHRMVEQIKREISIMKIVRHPHIVRLHEVLASRTKIYIILEFVSGGELYDKIVLQKKLPEIESRQYFQQLIDAVAHCHSKGVYHRDLKPENLLLDADGNLKVSDFGLSALSRQGVELLHTTCGTPNYVAPEVLGGQGYDGAAADIWSCGVILYVLMAGYLPFSEADLPTLNKKINAAEYSCPYWFSPGAKLLIQKILDPNPKTRIRIEEIRKDPWFRRSYVPAKLGKDEEVNLDDVQAVFDDIEEEYVADHSEKSDDGPLIMNAFEMITLSQGLNLSPLFDRGQDYIKRQTRFVSRKPANFIMSAIEVVAEAMALNVHTRNFKTRLERRTGHRVGQFAAVLEIYEVAPSLFMVDVRKAAGDTLEYHKFYKNFCAKLENIIWKPSESVGN | 437 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 66275846 | 66280351 | - | Tan0016757.1 | Tan09g1415 | 763758 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1415 | 437 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 272 | - | - | |
Tan09g1415 | 437 | CDD | CIPK_C | 311 | 426 | - | - | |
Tan09g1415 | 437 | ProSiteProfiles | NAF domain profile. | 305 | 329 | IPR018451 | GO:0007165(InterPro) | |
Tan09g1415 | 437 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 289 | IPR011009 | - | |
Tan09g1415 | 437 | Pfam | NAF domain | 307 | 366 | IPR004041 | GO:0007165(InterPro) | |
Tan09g1415 | 437 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 6 | 415 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Tan09g1415 | 437 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g1415 | 437 | FunFam | Non-specific serine/threonine protein kinase | 304 | 430 | - | - | |
Tan09g1415 | 437 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g1415 | 437 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 90 | - | - | |
Tan09g1415 | 437 | SMART | serkin_6 | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g1415 | 437 | FunFam | Non-specific serine/threonine protein kinase | 2 | 90 | - | - | |
Tan09g1415 | 437 | ProSiteProfiles | Protein kinase domain profile. | 11 | 264 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g1415 | 437 | FunFam | Non-specific serine/threonine protein kinase | 4 | 305 | - | - | |
Tan09g1415 | 437 | Gene3D | Kinase associated domain 1, KA1 | 304 | 430 | - | - | |
Tan09g1415 | 437 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 49 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2506 | Tan-Chr2:93633492 | Tan09g1415 | Tan-Chr9:66275846 | 1.40E-168 | dispersed | |
Tan07g1149 | Tan-Chr7:40503015 | Tan09g1415 | Tan-Chr9:66275846 | 1.10E-59 | dispersed | |
Tan09g1415 | Tan-Chr9:66275846 | Tan10g0068 | Tan-Chr10:1022351 | 2.70E-140 | dispersed | |
Tan09g1415 | Tan-Chr9:66275846 | Tan05g2668 | Tan-Chr5:78077264 | 2.10E-145 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68057 | PF00069 | Pkinase | 9.50E-71 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1415 | - | - | - | 0.0 |