Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1517 ATGGCATTTGATCAGAACTCGATTCCCACTGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTCGTTGAAGATCCCCGTATAAAGCCTGTTACTACTACGGCTCGAAACCCGGAATGGTTTATCCCCAACCATCCCCGCGACATCGTAAGTGCAGACTCTGTGGCCGTCCCTTCTAAGGGGAATGTCTCCGATATGGGAACTGTTGAGCTAGGATATGGAAATGTGGTTACTGGCGTTGCACCTTGGTGCCCTCGAATGCCTCCTCCTCTTGCACATCCTGCTACCATTCCTGCCGTAGGGTTTGGTTGCTGCTCGAACCTGAATGTCAGGGGCAATTGCGGTGGTGCCAATGCTATTGAGCTTGCCAGCAGTTGCATTACAGTTGGGATCAATCAGAGTCCAAATTTGAGTCATCAAGCTGGGGGAGGTGGCATGGAGTTTGTGAGCAATAATATCTCAACGGGGTCGGGGGATAGTACCAATTTATGCAACAAGGTGGCTGCCGACGGTGCGATCAGTAGTGATAGCACTTCTGGATCTAGTTCCCACTTGGGGAATTCGGTTGGTGGGAATGCGGCTGATCAAGTGAGTGAGGAGGGTGGAGATGGTTCCATTTCGAGAAAGAAAGTTAAGTTTTTGTGCAGTTTCGGTGGCAAGATTTTTCCTAGACCCAGTGATGGTATGCTGAGATATGTTGGAGGCCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGCTTGTGCGAAAGATGGTTGATGCCTGTGGGCAGGCTGTTGTTATTAAGTATCAGCTCCCCGATGAGGATCTTGATGCTTTAGTATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAATTGGTTGAGAGGTCTTCAGATGGATCGGTTAAATTGAGGATGTTTTTGTTTTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGCGATTTGCACGATAGTGGACAGAGATATGTTGAAACAATTAATGAGATATTTGATGGCGTTGGTGGCCGCATCACAAGGAAAGAGAGCTTTGCAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGGGACTGAGGCAATTGATATCTCAAATAACGATCTGGGGGTTGTGAGTGGGCCTCCATCCACAACATTGTCCTCACCTGGAGGAAATTTAGGTGCTTCAGTTGCTGTTGGCCCTGGATTAGTGAAGGTAGATCCCGTCTCTGCAGCTTTTATAGAAACCTCTGCTGTTCCATTAATTATTCCTGTGGTTAACTCTGTTCCTCCTGAAGCTTCTTCCCAGCCAGAGGTGGAGTTAGGAAGGTCTGTGCCTGCTGTTACTCTAATGCAGCAGCAACCAGGTAATGACTTTCCTCGACCTTTGTCTCAATTGCAGCCTACGGTTGATCCTCGCCAAGCCGCATGTGTGGACTATATACAATTTCGTCCACAACTAGGCTTTTCAAATCCTCATTATTTAGGGACATCTGGGTCTATGTTTATGCAACCACCAAATACTCTTGGAACTACCCCTCATCAGTTTGTCCCTTCAGTTCACATGACGGTGGCTCCCCCTTCTTCTCATCCCAGTATTATGCCAAATACATTCCAATCATTGGTGCATCCACAATCCCGGACGGAATATTTTGCCAATGCAAGCGCATTTGGTCCAAGGTTTGTCCAGGTATCTGCAGAACAAGGCTACAGTTCACGCCAGGTTCCAGCTCCTCCAGTATCGGTAGGAGGTGGTTTTGGTTTAAATCAGGTACCCTGGTCTGATCAGACAGTTACATCTGATCAATTGGTATCCCATTGCCAGTTAACTTTTTCTGAGAAGATCGAGAGGTTGGATGACTGTTACTTCTGCCAGAAAGCAGTGCCTCATGCTCATTCCAATTCTCTGTTGCAGGATCAAAGAGAAATTTTGACAAACCCTGTATCTGATTCAAAATTTTCGTATTACAGTCATCACCCTGAAGATCATTTGGCAGCCCAGCCAATGAAAAATATTACAGAAACTGGAGCTTCGGGGCAACAAACTATTGAACAAGGTGTTGGAATGCAAACTAAGATCTTTAATCCCATGGATCCCGAAGTTGGAAAACCTTCAGTGGAGGCTATTGGCTTCTCACATCATATTGTGGGTCAGCATGAGAATGACAACCCTCTAAAAGATAAGTGTAATCTTGATCATAGTAGGATCTCCGCTCTACAGGATGCTCTTGGGAGGCAAGGTGATATTCAGTCACCTAATGTTGTTCCTCAGTCTAGCCAAGTTGATACTCTCCAGCAGCATCATGCAGCTGTGGAGAATCAGTTCCATCCAAATCCAGATGTGGATAAGCAAGATATTCATTTTGGAGGTTCTCCTATCCTTGCTTCAGGGTACAATATCCATGAAAATCCAAAAGAGTACTCTAATAGTCATCATGGTATTATTCCGAATCAAAATGCTACCCACACTGGAATTTGGTATGACCATCTCAGACCAATTGTTGGAGATTTGGAAACTCTAAGTATATGCCCAACTGATATTTGTGCTAATTTTGATCGCTGCAAATCACCTATTGGAACAACTAGGAAGGAGAACAATTTTGATAGCTGTTCACAACCAGTCTTAGAGAGGGAAGTTCTACTTGGTGACAATTTTGTAAAGCCGGAAGTGGTTCTTGACACAAATCATGTGAGACCAACTACTTTTGCTTGTTCTTCATCAGAGGTTCCCTATTTGTTGAATGAACGACCTGTTGAGTCCAGTGAAGTGGCACACCTTCCTGTCAGGGGCTCTCCTGGAACGTTACCGCAATCAGAAAATGGTGTACAACATAAAGAATCCAATGAAGTCTGTCATAGCAGAAATCCCCAGCTATTTGACATGAAGACTGAACATTTAAATAATAAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTCGAATCCAGGATGGTATCTCTATCTGGTGATGTTGAATCTGTATCTATGCCAAGCAAAACTGGAAATACGCAGGACACCGGGAATTCACTCTTCAGCAACCAGGATCCTTGGAACTTACAGGATGATGCCCATTTTTTGCCTCCTCAACCAAATAAAATTCAAGCAGGGAATGAAGCCGTTGCCACCAAGGAACCCTTGACAGAGAGTCCTTTCAGGAATATTGGAGAAGTAAACATGGAAGCATTATTGGATGATGGAGTATGTCACCCACTGGTTAACTCAATCAAGGGCTCTTCGGAGGAACAAATTAGGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCACAATCCTCCAACTATGACTTGCATGAAAGAAGTGATTCATGTGAGACGAGTATAGAAGGAGATGTTCAAAATAATAACGATGTCAGGACAAGACATTCAGGAAAAGCAAATCTTGGTTTTCCAATGTCAGAAGGCTTTGGCCACTTACAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTAGGTTCTGGCACCTTTGGCACTGTTTATCACGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAGTCAATGATAGGTGCTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGAGAGAGGACTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGCCCTGGGGGCTCTGTGGCAACTGTAACAGAATATATGGTTAATGGCTCACTCAGAAATGCTTTGCTGAAGAATGAAAAGAGTCTTGACAAGTGGAAGCGCCTCTTGATTGCTATGGATGTGGCTTTTGGCATGGAATATCTGCACAGAAAGAATATAGTACACTTTGACTTAAAAAGTGATAATCTGCTTGTCAACCTTCGAGATCCTCGTCGCCCAATATGCAAGGTTGGTGATTTGGGCCTATCCAAGGTGAAACGTCAGACGTTGATATCAGGTGGTGTGCGGGGAACACTTCCATGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGATGTGTTTTCCTTTGGTATTGTCTTGTGGGAGCTCCTTACTGGTGAAGAACCTTATGCAAATTTGCGTTATGGGGCCATCATAGGTGGCATAGTAAGCAACACATTGCGACCAGAAGTACCGGAATCTTGTGATCCAGAATGGAGGTCACTTATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGGCCAAGCTTCACTGAAATTGCTCAAGAATTGCGCTCCATGGCTGCGAAGGTTCCTCAGAAAGTACCCAATCAGCAGCAGTAG 4338 44.63 MAFDQNSIPTGLRPLNVARTFVEDPRIKPVTTTARNPEWFIPNHPRDIVSADSVAVPSKGNVSDMGTVELGYGNVVTGVAPWCPRMPPPLAHPATIPAVGFGCCSNLNVRGNCGGANAIELASSCITVGINQSPNLSHQAGGGGMEFVSNNISTGSGDSTNLCNKVAADGAISSDSTSGSSSHLGNSVGGNAADQVSEEGGDGSISRKKVKFLCSFGGKIFPRPSDGMLRYVGGQTRIISVRRDVTFNELVRKMVDACGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSVKLRMFLFSASELDSSGMVQFGDLHDSGQRYVETINEIFDGVGGRITRKESFASATSTQNSDLSGTEAIDISNNDLGVVSGPPSTTLSSPGGNLGASVAVGPGLVKVDPVSAAFIETSAVPLIIPVVNSVPPEASSQPEVELGRSVPAVTLMQQQPGNDFPRPLSQLQPTVDPRQAACVDYIQFRPQLGFSNPHYLGTSGSMFMQPPNTLGTTPHQFVPSVHMTVAPPSSHPSIMPNTFQSLVHPQSRTEYFANASAFGPRFVQVSAEQGYSSRQVPAPPVSVGGGFGLNQVPWSDQTVTSDQLVSHCQLTFSEKIERLDDCYFCQKAVPHAHSNSLLQDQREILTNPVSDSKFSYYSHHPEDHLAAQPMKNITETGASGQQTIEQGVGMQTKIFNPMDPEVGKPSVEAIGFSHHIVGQHENDNPLKDKCNLDHSRISALQDALGRQGDIQSPNVVPQSSQVDTLQQHHAAVENQFHPNPDVDKQDIHFGGSPILASGYNIHENPKEYSNSHHGIIPNQNATHTGIWYDHLRPIVGDLETLSICPTDICANFDRCKSPIGTTRKENNFDSCSQPVLEREVLLGDNFVKPEVVLDTNHVRPTTFACSSSEVPYLLNERPVESSEVAHLPVRGSPGTLPQSENGVQHKESNEVCHSRNPQLFDMKTEHLNNKVPVSAEWKEDTSLFESRMVSLSGDVESVSMPSKTGNTQDTGNSLFSNQDPWNLQDDAHFLPPQPNKIQAGNEAVATKEPLTESPFRNIGEVNMEALLDDGVCHPLVNSIKGSSEEQIRKDLQAVAEGVAASVLQSAQSSNYDLHERSDSCETSIEGDVQNNNDVRTRHSGKANLGFPMSEGFGHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKWKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPRRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLRYGAIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPSFTEIAQELRSMAAKVPQKVPNQQQ 1445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67127064 67134345 + Tan0000728.1 Tan09g1517 763860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1517 1445 Pfam PB1 domain 229 312 IPR000270 GO:0005515(InterPro)
Tan09g1517 1445 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1254 1445 - -
Tan09g1517 1445 Pfam Protein tyrosine and serine/threonine kinase 1168 1429 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 MobiDBLite consensus disorder prediction 174 203 - -
Tan09g1517 1445 SUPERFAMILY Protein kinase-like (PK-like) 1158 1428 IPR011009 -
Tan09g1517 1445 MobiDBLite consensus disorder prediction 174 193 - -
Tan09g1517 1445 SUPERFAMILY CAD & PB1 domains 225 317 - -
Tan09g1517 1445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1291 1303 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 SMART serkin_6 1166 1432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 229 313 - -
Tan09g1517 1445 CDD PB1_UP2 213 311 - -
Tan09g1517 1445 SMART PB1_new 224 313 IPR000270 GO:0005515(InterPro)
Tan09g1517 1445 Gene3D - 230 313 - -
Tan09g1517 1445 Gene3D Phosphorylase Kinase; domain 1 1159 1253 - -
Tan09g1517 1445 ProSiteProfiles Protein kinase domain profile. 1166 1433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 ProSitePatterns Protein kinases ATP-binding region signature. 1172 1203 IPR017441 GO:0005524(InterPro)
Tan09g1517 1445 CDD STKc_MAP3K-like 1172 1429 - -
Tan09g1517 1445 PANTHER SERINE-THREONINE PROTEIN KINASE 171 1432 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan09g1517 1445 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1159 1253 - -
Tan09g1517 1445 PRINTS Tyrosine kinase catalytic domain signature 1400 1422 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 PRINTS Tyrosine kinase catalytic domain signature 1285 1303 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 PRINTS Tyrosine kinase catalytic domain signature 1248 1261 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 PRINTS Tyrosine kinase catalytic domain signature 1356 1378 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1517 1445 Gene3D Transferase(Phosphotransferase) domain 1 1254 1445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1540 Tan-Chr1:15701451 Tan09g1517 Tan-Chr9:67127064 4.30E-32 dispersed
Tan04g0811 Tan-Chr4:6904209 Tan09g1517 Tan-Chr9:67127064 6.50E-19 dispersed
Tan08g0803 Tan-Chr8:9040422 Tan09g1517 Tan-Chr9:67127064 5.10E-140 dispersed
Tan09g1517 Tan-Chr9:67127064 Tan10g0575 Tan-Chr10:4675685 1.40E-28 dispersed
Tan09g2303 Tan-Chr9:72944968 Tan09g1517 Tan-Chr9:67127064 5.10E-22 dispersed
Tan09g1517 Tan-Chr9:67127064 Tan05g3036 Tan-Chr5:82323651 2.20E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68064 PF07714 PK_Tyr_Ser-Thr 1.30E-60 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1517 - - - 0.0