Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1541 | ATGACAGTGGAGGGTCATTCCGTTGCTTCTGTCGGCGATGATGGCGCCACTGACCGTTTTCCTGTTGGGATGCGGGTTCTTGCTGTCGATGATGACCCTATTTGTCTCAAAGTGCTCGAAAATCTCCTCCGTAGATGCCAATATCATGTTACGACGACGAAGCAGTCCATTGAGGCTTTGAAGATGTTGAGAGAAAATAGAAACAATTTTGACTTGGTTATCAGTGATGTGAACATGCCTGATATGGATGGTTTCAAGCTCCTTGAGTTGGTGGGGCTTGAGATGGACCTACCTGTAATCATGTTATCAGCACATAGTGATACTGAGCTTGTTATGAAGGGGATTGCACACGGTGCGTGTGATTATCTGTTGAAACCGGTTCGAATTGAGGAGTTGAAGAACATTTGGCAGCATGTGATTCGGAGAAAGAAGCTTGAACCAAAGGCAAAGAACAAGTTCCCTAGTCAAGATAAGGCTCGAAATGGAGGCAGTGAGGGTGAGCAAGGTTTCTCATCAACCAGTAATGCAGACAATGCGAAATTCAATAGGAAGCGGAAGGACCAAGATGACGATGAAGATGAAGATGGAAAGGAGAATGGGTTTGATAATGACGACCCCTCAAATCAGAAGAAGCCTAGGGTAGTGTGGTCGGTTGAGTTGCACAGGAAGTTCGTTTCAGCGGTTAATCAGTTGGGTCTTGAAAAGGCCGTGCCAAAGAAAATCCTGGATCTGATGAATGTTGAAGGACTGACCAGAGAAAACGTGGCAAGTCATTTGCAGAAATATAGGCTTTATCTGAAAAGAATCAGCAATGTGGCATCCCAACAAGCTAACATGGTTGCTACATTTGGGAGTAAAGATGGTGCGTTCATGCGCATGGGTTCGCTTGATGGATATGGAGATTTACATGGCTTTGCAGGATCAGGACGGCTTCCAAACTCTTCATTATCCTCTTATTCACCTGTTGGAATGCTTGGAAGATTGAACTCCCCAGCTGGAATGAGCCTGCGTGGAATCACCTCTTCTGGACTGATACAGCAAAACTCCCAAAATTTGAACTCCGCTATTAGTAACCTTGGGAAGCTCCAGCCAACTACTATGCTGCCTTCTAACCAAACTACTAATCTGTTGCAAGGAATTCCAACATCGCTCGAGCTCAGCCAGTTGCAAGACAGCAAGTCCACCATTCCAATTGGAAACTTCAATATAATGAATCAGACATCCGAGTTTGGAGTTCCCAACAGTTTCCCTGATAGTAGAGTGAATATTGGAAATTCAACCAATTCGATCTCCACTGCCTCATTGATGTTACAAGGAACCATGCCAACATATGGAAATCAGAATTGTCTTAGAGTGGATCCGCTTAATGGAGAAACTTTTGACATAGACATTGGTGGTTCAAATTTTTTGGATCCTGATCCTTCCAATGGAAACTGGCAGGGAGCAGCACAATTGTCTAGATTCTCAGCTACTTCTTTGACACCCAATGAAGCCTATCCCAGTGATCAATTCAATGCAATGAACTCGAGCATTTCTTCTGCCCCCTCAACGATTGGGAACGTCTCTGTTGATTTTTCCTCTAGAAGTCCAGTTTCAGCTCCCTTGCAGGATTCAAGAGGTCTGCAATGCCAGGCAGGGGTTGTTGGCAGTGTTATTCAAACTATTAATACCATACCAAAGCAGAGTTGGGAAGAGCATAAACACGATTACAGTCGAAACGTGCAGCATAATCTTGGTGCAATCAATTCTCTGGTTTCCAGCAATGGGACTCTAAACCCCTTAAGCCAGAGTTTCAATCAGAATAATAGTCTAGCATATGATAGAAAGGTCAGTTCATCTTTGTTAGTCCCATCAAATTCTGCTCCACTGTCTTTTGCTCAACATAATGTGGTCGAAAAATTGGGTCCTAACATAAAGACGAATGCGGATGGAAACTACCTTTTGAATCAAACAAAGTCACACAATGGATCGATTCAAGGCAGTTTCGAGTCCTTGGATGATATAATGAACGCTATGATCAAACGGGTATAG | 2031 | 43.72 | MTVEGHSVASVGDDGATDRFPVGMRVLAVDDDPICLKVLENLLRRCQYHVTTTKQSIEALKMLRENRNNFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQDKARNGGSEGEQGFSSTSNADNAKFNRKRKDQDDDEDEDGKENGFDNDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGAFMRMGSLDGYGDLHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQNSQNLNSAISNLGKLQPTTMLPSNQTTNLLQGIPTSLELSQLQDSKSTIPIGNFNIMNQTSEFGVPNSFPDSRVNIGNSTNSISTASLMLQGTMPTYGNQNCLRVDPLNGETFDIDIGGSNFLDPDPSNGNWQGAAQLSRFSATSLTPNEAYPSDQFNAMNSSISSAPSTIGNVSVDFSSRSPVSAPLQDSRGLQCQAGVVGSVIQTINTIPKQSWEEHKHDYSRNVQHNLGAINSLVSSNGTLNPLSQSFNQNNSLAYDRKVSSSLLVPSNSAPLSFAQHNVVEKLGPNIKTNADGNYLLNQTKSHNGSIQGSFESLDDIMNAMIKRV | 676 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 67275508 | 67279970 | + | Tan0007731.1 | Tan09g1541 | 763884 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1541 | 676 | PIRSF | RR_ARR_type-B | 1 | 674 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Tan09g1541 | 676 | Pfam | Myb-like DNA-binding domain | 213 | 263 | IPR001005 | - | |
Tan09g1541 | 676 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Tan09g1541 | 676 | SUPERFAMILY | Homeodomain-like | 209 | 268 | IPR009057 | - | |
Tan09g1541 | 676 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 208 | 267 | IPR017930 | - | |
Tan09g1541 | 676 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 21 | 375 | IPR045279 | GO:0009736(InterPro) | |
Tan09g1541 | 676 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160(InterPro) | |
Tan09g1541 | 676 | MobiDBLite | consensus disorder prediction | 157 | 178 | - | - | |
Tan09g1541 | 676 | SUPERFAMILY | CheY-like | 23 | 148 | IPR011006 | - | |
Tan09g1541 | 676 | FunFam | Two-component response regulator | 207 | 270 | - | - | |
Tan09g1541 | 676 | Gene3D | - | 207 | 270 | - | - | |
Tan09g1541 | 676 | Gene3D | - | 24 | 189 | - | - | |
Tan09g1541 | 676 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160(InterPro) | |
Tan09g1541 | 676 | MobiDBLite | consensus disorder prediction | 147 | 210 | - | - | |
Tan09g1541 | 676 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160(InterPro) | |
Tan09g1541 | 676 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 211 | 264 | IPR006447 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0321 | Tan-Chr8:2772898 | Tan09g1541 | Tan-Chr9:67275508 | 1.20E-86 | dispersed | |
Tan08g0322 | Tan-Chr8:2772898 | Tan09g1541 | Tan-Chr9:67275508 | 4.30E-153 | dispersed | |
Tan09g1541 | Tan-Chr9:67275508 | Tan10g1050 | Tan-Chr10:9414877 | 1.00E-85 | dispersed | |
Tan09g1541 | Tan-Chr9:67275508 | Tan09g1542 | Tan-Chr9:67275508 | 0.00E+00 | tandem | |
Tan06g2744 | Tan-Chr6:79755643 | Tan09g1541 | Tan-Chr9:67275508 | 1.40E-42 | transposed | |
Tan01g3584 | Tan-Chr1:100891063 | Tan09g1541 | Tan-Chr9:67275508 | 3.10E-127 | wgd | |
Tan08g0308 | Tan-Chr8:2772898 | Tan09g1541 | Tan-Chr9:67275508 | 2.10E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28357 | PF00072 | Response_reg | 1.80E-25 | CL0304 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1541 | K14491 | - | csv:101213687 | 1145.18 |