Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1556 ATGGCGTTGTTGCGCAAATTGTTCTTCCGGAAACCGCCCGATGGCCTTCTCGAGATCTGTGAAAGAGTTTATGTTTTTGATTGCTGTTTTACCACGGGTGCTTGGAAGGAAGAGAATTATGATGTTTACTTAGGTGGAATAGTGGCTCAACTCCGAGAACATTTAGCAGACGCTTCGTTCTTGGTATTCAATTTTAGGAGATTAGAGATGCAAAGTCAGATGGGTGATATCTTATCTAAGTATGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGTCCAGTTCTGACAATGGAAGTGATTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTCGGGCAGAATAATGTTTTGTTAATGCACTGTGAACGTGGTGGCTGGCCAGTTTTAGCTTTCATGCTTTCGGGTCTCTTGATTTATAGGAAACAATATAGTGGGGAACAAAGGACATTGGACATGGTTTACAGGCAGGCACCTCGGGAGCTTTTGCATTTTTTGTCTCCCATGAATCCGGTTCCTTCTCAATTACGGTATCTGCAATATGTCGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTCACTTTGGATTGCATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAAGATCCTCTGCTTGTCAGCGATCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATATCCGTACTTACAAACAGGTAGAATCAGAACTGGTTAAGATTGATGTAAATTGCCATATTCAAGGTGATGTTGTTCTTGAGTGCATCTCATTGCACGATGACATGGAATTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTCAACCGTGAAGAGATCGACACTTTGTGGAATGCTAAAGATAAATTTCCAAAGGACTTTCGAGCAGAGATTCTTTTCTCTGAGATGGATGCTGGAACTTGTACTGTTGCAAATGATGTACTTTGCTTTGAGGAGGAAGGTCTCCCCATTGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCGAAAGCAGATGTTGCGCTCAATGTGCTCCATCAGATGAATGCCTTAAACATAGCCCAAGAGAAGTCAGATAATAATTCTCTTTGGAGTACGCAAGTTAGTCCTTTACTTCAGAGTACAAGTCCCAGAAAACTTCCGCAGAAGAAATTCACACTGGAGAACAAAACAAAACTCCTAGAGAAGGAAGAATCTAGTCCAACATCTAAATTTTCGCTGGATGCTGCTAAAACTGACCAGAACAATGAATCCAATTCAGTATTCAAACAGGTGCCTCAATCTTCAGAGTGTTTCCCACTTGACATTTTGCAAGATTCGCCAATTTCAGAGAGAAGTGATAGGACCTCATACAGTGCTTCGGTTGGAAGCCATTCATTTCTTGATTCTGAAGGAGAAGCAAAGGTTTCTCATCTGAAAACTTTGTCTTCATCTTTTCCGAATGCAGCATTGGCTGTTTCTCTTGCACCTGAATCTCTACAGACGAAAAGTTCCCTTACAGAAACAACAATCCCACCACCTCCTCCTCTCCCCCAACTTTCCACGAATATTTCTGCTGCTAATTCTCTACCTTATCCTCCCCCTCCTCCAACTGCATCACCACTTCAGTCTAATCACATTTCAACTCTAAGACCAGATAAATTTTCACTTACCGAGGAAATGGAAAACTATTCAGAGGATCAAAGTCAGTTATCAATCATTAGCCCTCCCCGGTCTGTGACCTCTGCAATTTGGTCCTCAATACAGTCTTCTCCACCACCTCCACCACCACCTCCTTCTACACCTCCTTTGAAGGATACCATAGCAGCTAGAGTTAAAGCTTCTCCGCCACCACCCTCTCCTTTTCCTTTATCATTAGCTTCCCACCCTACAATTGCATCCTTAGTGCCTCCTCCACCACCACCTCCTCCTCCTCCAACATCTACTGTTAATAGTAAAATTTCATCTCCAATCCCTTCACCACCACCACCTCCTCCTCCAATGGCTATTACAGATCCTAAATTTTTCTCTCCCATGCCTCCACCGCCACCACCTCTTCCTCTGACATCCAAACAGGTTGAAAGTACTTCAACATCTCCACTTGTTCCTCCTCCTCCACCACCACCTCTTCCTATGACGTCCAGGCAGGTTGGAAGTACTTCAACATCTTCGTCTGTTCCTCCACCACCACCACCTCTTCCATCTAGACAGGCTGGAAGTACTTCAACATCTCCATCCGTTCCTCGTCCTCCACCACCACCTGCTTCCGCCAAGGGCTCCTCCCCAGCTGTTCCTTCTGTTCCTCGTCCTCCACCTCCACCTGCTTCCTCCAAGGGCTCCTCCCCACCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGAGGGACTTCAAAATCTGGTGAACTGTTTCCTGGTTCTCTTTCGTCTAGGTCTTCCTCTCCCGGGCCACCTAGTAGTTCTCCTTCAAGTGTAAAGGGACGAAGCTTGTCACGCACTATAAGTTCAAGAACACATATAACTAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCCAAAGCAGTGCAAGGAAGCTTATGGGCTGAAACTCAAAAAACTGGTGAAGCTGCCAGGGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCGGCAGTCCCTGCTCCTGATCAGAACAAGAAATCGAGTGGACGTGGTTCTGTTGGGAATAAACCCGAGAAAGTGCAACTGATTGATCACAGGCGAGCTTACAATTGTGAAATTATGCTTTCAAAGGTCAAGGTGCCTTTGCCTGATTTAATGAGTTCTGTGCTTGACCTTGAAGATTCAGCGCTAGATATTGATCAGGTTGAGAATCTTATTAAGTTTTGCCCGACAAAGGAGGAAATGGATTTGCTCAAGGGCTACACCGGAGAAAAGGAGAGGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAATCTAAACTTCGAGTTTTCTCATTTAAGATACAGTTCAGCTCTCAGGTCACTGACCTCAAAAAAAGCCTGAACTTTGTTAATTCTGCAGCAGAAGAGATAAAAAGTTCAGTCAAGTTGAAGAGAATCATGCAGACAATACTATCTCTAGGAAATGCTTTAAACCAGGGAACAGCAAGGGGCTCTGCTATAGGATTTAGGCTGGATAGTCTTCTTAAACTGACAGACACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATCCTTGCTGACAAACTGCCAGAAGTTCTGGATTTTTCTAAAGATCTTGCAAGCTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATAAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCTATATCTAATAATTTCCGAATGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACCTTGGCTTCACTGTACTCTAGCGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTTGTGAGAATGTTTAACCAAGCCCACGAGGAAAACTGCAAGCAGATAGAGCTCGAAATGAAAAAAGCGACTGAAAGCGAAAAATCAAAGACGGGGCACTTGCATAAGAGGACGAGAACGAGACAGTTATCACGCTCCCAGATCGAGATTGGCAATGTCAAGTAA 3876 43.5 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTGAWKEENYDVYLGGIVAQLREHLADASFLVFNFRRLEMQSQMGDILSKYDMTIMDYPQQYEGCPVLTMEVIHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSGLLIYRKQYSGEQRTLDMVYRQAPRELLHFLSPMNPVPSQLRYLQYVARRNVALEWPPMDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNIRTYKQVESELVKIDVNCHIQGDVVLECISLHDDMEFEEMMFRAMFNTAFIRSNILILNREEIDTLWNAKDKFPKDFRAEILFSEMDAGTCTVANDVLCFEEEGLPIEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALNIAQEKSDNNSLWSTQVSPLLQSTSPRKLPQKKFTLENKTKLLEKEESSPTSKFSLDAAKTDQNNESNSVFKQVPQSSECFPLDILQDSPISERSDRTSYSASVGSHSFLDSEGEAKVSHLKTLSSSFPNAALAVSLAPESLQTKSSLTETTIPPPPPLPQLSTNISAANSLPYPPPPPTASPLQSNHISTLRPDKFSLTEEMENYSEDQSQLSIISPPRSVTSAIWSSIQSSPPPPPPPPSTPPLKDTIAARVKASPPPPSPFPLSLASHPTIASLVPPPPPPPPPPTSTVNSKISSPIPSPPPPPPPMAITDPKFFSPMPPPPPPLPLTSKQVESTSTSPLVPPPPPPPLPMTSRQVGSTSTSSSVPPPPPPLPSRQAGSTSTSPSVPRPPPPPASAKGSSPAVPSVPRPPPPPASSKGSSPPVPSAPPPPTLSGRGTSKSGELFPGSLSSRSSSPGPPSSSPSSVKGRSLSRTISSRTHITKKLKPLHWLKLSKAVQGSLWAETQKTGEAARAPEIDMSELESLFSAAVPAPDQNKKSSGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKVPLPDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYTGEKERLGKCEQFFLELMQVPRVESKLRVFSFKIQFSSQVTDLKKSLNFVNSAAEEIKSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKILADKLPEVLDFSKDLASLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRMVLKEFLRFAEAEVRTLASLYSSVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNQAHEENCKQIELEMKKATESEKSKTGHLHKRTRTRQLSRSQIEIGNVK 1291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67424989 67441603 - Tan0016265.1 Tan09g1556 763899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1556 1291 SMART PTEN_C2_2 197 337 IPR014020 -
Tan09g1556 1291 SMART it6_source 541 1291 IPR015425 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 617 874 - -
Tan09g1556 1291 Gene3D Formin, FH2 domain 868 1253 IPR042201 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 922 944 - -
Tan09g1556 1291 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 1261 1291 - -
Tan09g1556 1291 Gene3D Protein tyrosine phosphatase superfamily 15 199 IPR029021 -
Tan09g1556 1291 PANTHER FORMIN-J 756 1267 IPR051144 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 667 723 - -
Tan09g1556 1291 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 779 826 - -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 733 747 - -
Tan09g1556 1291 SUPERFAMILY Formin homology 2 domain (FH2 domain) 943 1262 - -
Tan09g1556 1291 Gene3D - 200 340 - -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 538 580 - -
Tan09g1556 1291 Coils Coil 1243 1263 - -
Tan09g1556 1291 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 827 872 - -
Tan09g1556 1291 MobiDBLite consensus disorder prediction 623 638 - -
Tan09g1556 1291 ProSiteProfiles Formin homology-2 (FH2) domain profile. 869 1268 IPR015425 -
Tan09g1556 1291 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 186 IPR029021 -
Tan09g1556 1291 Pfam Formin Homology 2 Domain 876 1243 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3568 Tan-Chr1:100659106 Tan09g1556 Tan-Chr9:67424989 6.80E-288 dispersed
Tan05g2418 Tan-Chr5:75369701 Tan09g1556 Tan-Chr9:67424989 3.40E-252 dispersed
Tan09g1556 Tan-Chr9:67424989 Tan11g1841 Tan-Chr11:21780683 7.90E-257 dispersed
Tan09g1556 Tan-Chr9:67424989 Tan09g1557 Tan-Chr9:67424989 0.00E+00 tandem
Tan01g3567 Tan-Chr1:100659106 Tan09g1556 Tan-Chr9:67424989 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1556 K28090 - csv:101221713 1951.02