Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1557 ATGCAAAGTCAGATGGGTGATATCTTATCTAAGTATGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGTCCAGTTCTGACAATGGAAGTGATTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTCGGGCAGAATAATGTTTTGTTAATGCACTGTGAACGTGGTGGCTGGCCAGTTTTAGCTTTCATGCTTTCGGGTCTCTTGATTTATAGGAAACAATATAGTGGGGAACAAAGGACATTGGACATGGTTTACAGGCAGGCACCTCGGGAGCTTTTGCATTTTTTGTCTCCCATGAATCCGGTTCCTTCTCAATTACGGTATCTGCAATATGTCGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTCACTTTGGATTGCATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAAGATCCTCTGCTTGTCAGCGATCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATATCCGTACTTACAAACAGGTAGAATCAGAACTGGTTAAGATTGATGTAAATTGCCATATTCAAGGTGATGTTGTTCTTGAGTGCATCTCATTGCACGATGACATGGAATTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTCAACCGTGAAGAGATCGACACTTTGTGGAATGCTAAAGATAAATTTCCAAAGGACTTTCGAGCAGAGATTCTTTTCTCTGAGATGGATGCTGGAACTTGTACTGTTGCAAATGATGTACTTTGCTTTGAGGAGGAAGGTCTCCCCATTGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCGAAAGCAGATGTTGCGCTCAATGTGCTCCATCAGATGAATGCCTTAAACATAGCCCAAGAGAAGTCAGATAATAATTCTCTTTGGAGTACGCAAGTTAGTCCTTTACTTCAGAGTACAAGTCCCAGAAAACTTCCGCAGAAGAAATTCACACTGGAGAACAAAACAAAACTCCTAGAGAAGGAAGAATCTAGTCCAACATCTAAATTTTCGCTGGATGCTGCTAAAACTGACCAGAACAATGAATCCAATTCAGTATTCAAACAGGTGCCTCAATCTTCAGAGTGTTTCCCACTTGACATTTTGCAAGATTCGCCAATTTCAGAGAGAAGTGATAGGACCTCATACAGTGCTTCGGTTGGAAGCCATTCATTTCTTGATTCTGAAGGAGAAGCAAAGGTTTCTCATCTGAAAACTTTGTCTTCATCTTTTCCGAATGCAGCATTGGCTGTTTCTCTTGCACCTGAATCTCTACAGACGAAAAGTTCCCTTACAGAAACAACAATCCCACCACCTCCTCCTCTCCCCCAACTTTCCACGAATATTTCTGCTGCTAATTCTCTACCTTATCCTCCCCCTCCTCCAACTGCATCACCACTTCAGTCTAATCACATTTCAACTCTAAGACCAGATAAATTTTCACTTACCGAGGAAATGGAAAACTATTCAGAGGATCAAAGTCAGTTATCAATCATTAGCCCTCCCCGGTCTGTGACCTCTGCAATTTGGTCCTCAATACAGTCTTCTCCACCACCTCCACCACCACCTCCTTCTACACCTCCTTTGAAGGATACCATAGCAGCTAGAGTTAAAGCTTCTCCGCCACCACCCTCTCCTTTTCCTTTATCATTAGCTTCCCACCCTACAATTGCATCCTTAGTGCCTCCTCCACCACCACCTCCTCCTCCTCCAACATCTACTGTTAATAGTAAAATTTCATCTCCAATCCCTTCACCACCACCACCTCCTCCTCCAATGGCTATTACAGATCCTAAATTTTTCTCTCCCATGCCTCCACCGCCACCACCTCTTCCTCTGACATCCAAACAGGTTGAAAGTACTTCAACATCTCCACTTGTTCCTCCTCCTCCACCACCACCTCTTCCTATGACGTCCAGGCAGGTTGGAAGTACTTCAACATCTTCGTCTGTTCCTCCACCACCACCACCTCTTCCATCTAGACAGGCTGGAAGTACTTCAACATCTCCATCCGTTCCTCGTCCTCCACCACCACCTGCTTCCGCCAAGGGCTCCTCCCCAGCTGTTCCTTCTGTTCCTCGTCCTCCACCTCCACCTGCTTCCTCCAAGGGCTCCTCCCCACCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGAGGGACTTCAAAATCTGGTGAACTGTTTCCTGGTTCTCTTTCGTCTAGGTCTTCCTCTCCCGGGCCACCTAGTAGTTCTCCTTCAAGTGTAAAGGGACGAAGCTTGTCACGCACTATAAGTTCAAGAACACATATAACTAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCCAAAGCAGTGCAAGGAAGCTTATGGGCTGAAACTCAAAAAACTGGTGAAGCTGCCAGGGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCGGCAGTCCCTGCTCCTGATCAGAACAAGAAATCGAGTGGACGTGGTTCTGTTGGGAATAAACCCGAGAAAGTGCAACTGATTGATCACAGGCGAGCTTACAATTGTGAAATTATGCTTTCAAAGGTCAAGGTGCCTTTGCCTGATTTAATGAGTTCTGTGCTTGACCTTGAAGATTCAGCGCTAGATATTGATCAGGTTGAGAATCTTATTAAGTTTTGCCCGACAAAGGAGGAAATGGATTTGCTCAAGGGCTACACCGGAGAAAAGGAGAGGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAATCTAAACTTCGAGTTTTCTCATTTAAGATACAGTTCAGCTCTCAGGTCACTGACCTCAAAAAAAGCCTGAACTTTGTTAATTCTGCAGCAGAAGAGATAAAAAGTTCAGTCAAGTTGAAGAGAATCATGCAGACAATACTATCTCTAGGAAATGCTTTAAACCAGGGAACAGCAAGGGGCTCTGCTATAGGATTTAGGCTGGATAGTCTTCTTAAACTGACAGACACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATCCTTGCTGACAAACTGCCAGAAGTTCTGGATTTTTCTAAAGATCTTGCAAGCTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATAAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCTATATCTAATAATTTCCGAATGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACCTTGGCTTCACTGTACTCTAGCGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTTGTGAGAATGTTTAACCAAGCCCACGAGGAAAACTGCAAGCAGATAGAGCTCGAAATGAAAAAAGCGACTGAAAGCGAAAAATCAAAGACGGGGCACTTGCATAAGAGGACGAGAACGAGACAGTTATCACGCTCCCAGATCGAGATTGGCAATGTCAAGTAA 3669 43.53 MQSQMGDILSKYDMTIMDYPQQYEGCPVLTMEVIHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSGLLIYRKQYSGEQRTLDMVYRQAPRELLHFLSPMNPVPSQLRYLQYVARRNVALEWPPMDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNIRTYKQVESELVKIDVNCHIQGDVVLECISLHDDMEFEEMMFRAMFNTAFIRSNILILNREEIDTLWNAKDKFPKDFRAEILFSEMDAGTCTVANDVLCFEEEGLPIEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALNIAQEKSDNNSLWSTQVSPLLQSTSPRKLPQKKFTLENKTKLLEKEESSPTSKFSLDAAKTDQNNESNSVFKQVPQSSECFPLDILQDSPISERSDRTSYSASVGSHSFLDSEGEAKVSHLKTLSSSFPNAALAVSLAPESLQTKSSLTETTIPPPPPLPQLSTNISAANSLPYPPPPPTASPLQSNHISTLRPDKFSLTEEMENYSEDQSQLSIISPPRSVTSAIWSSIQSSPPPPPPPPSTPPLKDTIAARVKASPPPPSPFPLSLASHPTIASLVPPPPPPPPPPTSTVNSKISSPIPSPPPPPPPMAITDPKFFSPMPPPPPPLPLTSKQVESTSTSPLVPPPPPPPLPMTSRQVGSTSTSSSVPPPPPPLPSRQAGSTSTSPSVPRPPPPPASAKGSSPAVPSVPRPPPPPASSKGSSPPVPSAPPPPTLSGRGTSKSGELFPGSLSSRSSSPGPPSSSPSSVKGRSLSRTISSRTHITKKLKPLHWLKLSKAVQGSLWAETQKTGEAARAPEIDMSELESLFSAAVPAPDQNKKSSGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKVPLPDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYTGEKERLGKCEQFFLELMQVPRVESKLRVFSFKIQFSSQVTDLKKSLNFVNSAAEEIKSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKILADKLPEVLDFSKDLASLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRMVLKEFLRFAEAEVRTLASLYSSVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNQAHEENCKQIELEMKKATESEKSKTGHLHKRTRTRQLSRSQIEIGNVK 1222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67424989 67441603 - Tan0016265.2 Tan09g1557 763900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1557 1222 MobiDBLite consensus disorder prediction 853 875 - -
Tan09g1557 1222 Gene3D Protein tyrosine phosphatase superfamily 2 122 IPR029021 -
Tan09g1557 1222 ProSiteProfiles Formin homology-2 (FH2) domain profile. 800 1199 IPR015425 -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 758 803 - -
Tan09g1557 1222 Pfam Formin Homology 2 Domain 807 1174 IPR015425 -
Tan09g1557 1222 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 132 269 IPR035892 -
Tan09g1557 1222 SMART it6_source 472 1222 IPR015425 -
Tan09g1557 1222 Gene3D - 127 271 - -
Tan09g1557 1222 Pfam C2 domain of PTEN tumour-suppressor protein 129 268 IPR014020 -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 469 511 - -
Tan09g1557 1222 Coils Coil 1174 1194 - -
Tan09g1557 1222 Gene3D Formin, FH2 domain 799 1184 IPR042201 -
Tan09g1557 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 117 IPR029021 -
Tan09g1557 1222 PANTHER FORMIN-J 687 1198 IPR051144 -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 554 569 - -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 664 678 - -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 548 805 - -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 598 654 - -
Tan09g1557 1222 ProSiteProfiles C2 tensin-type domain profile. 130 269 IPR014020 -
Tan09g1557 1222 SMART PTEN_C2_2 128 268 IPR014020 -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 1192 1222 - -
Tan09g1557 1222 MobiDBLite consensus disorder prediction 710 757 - -
Tan09g1557 1222 SUPERFAMILY Formin homology 2 domain (FH2 domain) 874 1193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3567 Tan-Chr1:100659106 Tan09g1557 Tan-Chr9:67424989 2.70E-290 dispersed
Tan09g1557 Tan-Chr9:67424989 Tan11g1841 Tan-Chr11:21780683 5.20E-234 dispersed
Tan09g1556 Tan-Chr9:67424989 Tan09g1557 Tan-Chr9:67424989 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1557 K28090 - csv:101221713 1861.27