Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1601 ATGCTCTTCTTCTTTTTCTTTCTTCTGCATTTCTTCCCAGCTATGGTTCCTAAACTCTTCTCTTTGATCATTCTTTCTTCTGCTTTCCTATGCCTTTCCTATGAACCTCGAAATCCTGAAGTGGAAGCTCTGATTAATGTGAAGACGGCATTGAATGATCCGCACGGCGTACTCAGCAATTGGGATGAAGACTCTGTGGACCCTTGCAGTTGGGCAATGATCACCTGCTCCCCTGAGAACCTCGTTATAGGACTAGGAGCTCCGAGCCAGTCTCTTTCCGGAAGCTTGTCTGGGGCGATTGGGAACCTCACAAATCTTCGCCAAGTGCTGCTGCAGAACAACAACATTTCTGGTCCGATTCCCATTGAACTTGGAACTCTCACTATGCTTCAAACATTAGATCTCTCAAACAATCGGTTCTCTGGCCCTATACCCGTATCCTTTGGTCAGCTGAACGGTCTACGCTACCTGAGGGTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTTGTCTTTGGCCAGAATCCCCCAGCTTGCTTTCTTGGACTTGTCCTTTAACAATCTCAGTGGACCAGTGCCTGTGTTTCCAGCTAGAACATTCAATGTGGTGGGAAATCCGATGATTTGTGGAAGTAATCCTAGTGAAGGTTGCTCTGGCTCAGCCAATGCCGTTCCTTTATCTTTCTCTCTAGAATCATCCCCTGGAAGACTCAGGTACAAAAGAATAGCAGTGGCACTTGGGGTCAGCCTCAGCTGTGGTTTTCTGATAATCCTAGCACTTGGAATTCTGTGGCGCAGAAAAAATCACAAGACCAAAACCATCCTAGACATCAATGTAGGCAATCAAGAAGTTGGACTTGTGCGCTTAGGGAACCTGAGAAACTTCAGTTTCAAAGAGCTCCAGTTAGCAACAGACCATTTTAGTTCCAAACATATACTTGGGGCTGGAGGATTTGGTAATGTGTACAAGGGAAAGCTAGGAGATGGGACTATGGTGGCAGTGAAACGGCTAAAAGATGTAACGGGTACCACTGGAGAGTCCCAGTTCCGCACAGAGTTGGAGATGATTAGCCTTGCAGTTCATCGCAATTTGCTTCGGTTAATTGGTTATTGCGCCACTTCTCACGAGAGGCTATTGGTGTATCCTTACATGTCAAATGGCAGTGTAGCTTCCAGGCTCAGAGGAAAACCAGCCTTGGACTGGAACACGAGGAAGAGAATAGCAATTGGAGCTGCAAGGGGTCTGCTCTACCTCCATGAGCAATGTGATCCCAAGATAATCCATAGAGACGTGAAGGCTGCCAATGTGCTTCTAGATGACTTCTGCGAAGCTGTAGTTGGTGATTTTGGACTTGCAAAGCTTCTTGACCATGCTGACTCTCATGTGACCACTGCAGTTCGTGGCACTGTCGGGCACATCGCTCCGGAGTATCTTTCGACTGGCCAATCCTCTGAGAAGACTGATGTGTTTGGGTTTGGCATTCTTTTGATAGAGCTAATAACTGGGATGAGAGCTCTTGAATTTGGGAAAACAATCAATCAAAAAGGCGCCATGCTTGAGTGGGTAAGTCTTAACTATAATCTAAAAGCTATCTTAGCTAATTTGACTTTATCAATGATTGAAGCTAACATCTATGGTTGCTGCTTTTGA 1650 45.94 MLFFFFFLLHFFPAMVPKLFSLIILSSAFLCLSYEPRNPEVEALINVKTALNDPHGVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIGNLTNLRQVLLQNNNISGPIPIELGTLTMLQTLDLSNNRFSGPIPVSFGQLNGLRYLRVNNNSLSGPFPLSLARIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGSNPSEGCSGSANAVPLSFSLESSPGRLRYKRIAVALGVSLSCGFLIILALGILWRRKNHKTKTILDINVGNQEVGLVRLGNLRNFSFKELQLATDHFSSKHILGAGGFGNVYKGKLGDGTMVAVKRLKDVTGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHERLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMRALEFGKTINQKGAMLEWVSLNYNLKAILANLTLSMIEANIYGCCF 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67794965 67800148 + Tan0004405.2 Tan09g1601 763944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1601 549 Pfam Protein kinase domain 308 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1601 549 FunFam Somatic embryogenesis receptor kinase 1 276 383 - -
Tan09g1601 549 Gene3D Transferase(Phosphotransferase) domain 1 384 543 - -
Tan09g1601 549 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524(InterPro)
Tan09g1601 549 Gene3D Phosphorylase Kinase; domain 1 277 383 - -
Tan09g1601 549 SMART serkin_6 307 549 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1601 549 ProSiteProfiles Protein kinase domain profile. 307 549 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1601 549 Gene3D Ribonuclease Inhibitor 37 219 IPR032675 -
Tan09g1601 549 Pfam Leucine rich repeat 130 188 IPR001611 GO:0005515(InterPro)
Tan09g1601 549 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 523 - -
Tan09g1601 549 FunFam Putative LRR receptor-like serine/threonine-protein kinase 37 219 - -
Tan09g1601 549 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Tan09g1601 549 SUPERFAMILY L domain-like 38 202 - -
Tan09g1601 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1601 549 Pfam Leucine Rich Repeat 105 127 IPR001611 GO:0005515(InterPro)
Tan09g1601 549 SUPERFAMILY Protein kinase-like (PK-like) 287 513 IPR011009 -
Tan09g1601 549 FunFam Somatic embryogenesis receptor-like kinase 1 384 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1601 Tan-Chr9:67794965 Tan09g1604 Tan-Chr9:67794965 4.10E-239 dispersed
Tan09g1600 Tan-Chr9:67794965 Tan09g1601 Tan-Chr9:67794965 4.60E-245 tandem
Tan09g1601 Tan-Chr9:67794965 Tan09g1602 Tan-Chr9:67794965 1.40E-223 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68070 PF00069 Pkinase 1.50E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1601 - - - 0.0