Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1637 ATGGGCATGGAATTGAGGAAGGAAAAGCTTGTTAGGTTTTATTCTGATCACAAAAAACATAAGAAATCTGCCATTGGAAACAACAATGAAGCAGTGCAACTTGAGAAGTCATCATCGAAATACTATATTCCGTCGTCAACATTCTTAATACCTGACAATGGACTAGGGGGAAGCAAAAGTAAATTCGCCGAAACTTTTAGAACTGAGAAGTCCAAGGTGTTTCCAGAAGACCATGAACCATGGAGCAAAAGAATACTAGACCCTGGTAGCAAAATTGTTTTGAAATGGAACCGGGTGTTCATTTGCTCATGCTTATTGGCACTCTTTGTTGACCCGCTGTATCTTTATTTGCCCGCTTTGGTTGGGAATGGGCAATCCTCATGTGTGAGGACAGACTGGAAATTGCGAATTGTTGTGACCTGTTTCCGGACCGTTGCAGATTTTTTCTATCTTCTGCACATGATTATAAAGTTCAGAACAGCTTATGTTGCTCCTAGCTCTCGAGTTTTTGGGAGAGGTGAGCTTGTTATGGATTCAAAAATGATAGCAAAGAGGTATATTAGATCTGACTTTTTTGTCGATCTAATTGCCACCCTGCCTCTCCCTCAGATTGTCATCTGGTTCATCATACCTGCAACAAGAAGTCGTCTAACCGATCATAAAAACAATGCTCTTGCACTTATTGTTCTGCTTCAATTTATTCCGAGATTGTATTTGATTTTCCCTCTAAGTTCAGAGATCATCAAAGCAAATGGAGTTGTTACAAAGACAGCTTGGGCAGGAGCTGCTTATAATCTTCTACTATATATGTTGGCTAGCCATGTTCTAGGTGCTACATGGTATTTGCTGTCAGTTGATAGATATACATCATGCTGGAAATCATTTTGTAGGAAGAAGGAATATAATCCACTAGAATGCAATCTAACTTTTTTTGATTGCGATACATTTAATCTTAATGACCGCAATTCATGGGCAAATAGTACACTTGTTTTTGACAAATGTGGCCCTGATGGAATTTTCAAGTATGGCATTTTTGGGAATGCAATGTCAAAGAATGTTGTCTCTTCCAGCTTTATTGAAAAGTACTTCTATTGTTTGTGGTGGGGCTTGCAAAACCTGAGTTCATATGGACAGAATTTGGAAACAACCACATTCATCGGTGAGACACTGTTCGCTGTGCTTATTGCCATCTTAGGCCTTGTATTATTTGCCCATCTGATTGGGAATATGCAGACGTATCTGCAATCCCTCACTGTGAGGCTTGAAGAATGGAGACTAAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGTCAACTCCCTGAAGACTTGAAAGGGCGTGTTCGACGTTTTGTACAATATAAGTGGGTAGCAACTCGAGGAGTTGATGAAGAAGCCATCTTGCAGAGCTTGCCCGCGGATCTACGGCGTGATATTCAGTGCCACCTATGTCTAGATCTTGTTCGAAGAGTCCCTTTCTTCGCACAGATGGATGATCAGCTACTCGATGCAATATGTGAACGTTTGGTATCCTCCTTGAGCACTGAGGGTACCTATATTGTACGAGAAGGTGACCCGGTAACCGAGATGCTGTTCATTATCCGGGGCAGATTGGAGAGTTCTACTACAAATGGAGGTCGCTCTGGTTTCTTCAACTCCATAATGTTGCGTCCTGGAGACTTTTGTGGGGAGGAACTACTTTCTTGGGCCTTGAACCCAAAATCTACCGCCAACTTGCCCTCCTCAACTAGAACAGTCAGAGCGCTCAATGAAGTTGAAGCTTTTGCACTCCGTGCTGAAGATCTTAAATTTGTAGCCAACCAATTTAGACGTCTGCACAGTAAAAAGTTGCAGCACACATTCCGCTTTTACTCTCATCATTGGAGAACATGGGCAGCTTGCTTTATTCAGGCTGCTTGGCGTCGCCATAAGAAAAGGATGATGGCAAAAGATCTCTTAATGAAGGAATCATTTATATTATCTGAAAAAGTTGCTGATGAAACTGGCCAAGGAGGGGAACAATTTTCTGTTGTATCAAATCCTTCTCAGACAAAAATGTATCTGGATGTTACCTTACTGGCTTCAAGGTTTGCTGCAAACACAAGAAGAGGCGTTCAGAGAATGAAAGATGACATGCCAAAGTTACAGAAGCCTGATGAACCCGACTTTTCCATCGAGCCAGATAGATAA 2190 41.78 MGMELRKEKLVRFYSDHKKHKKSAIGNNNEAVQLEKSSSKYYIPSSTFLIPDNGLGGSKSKFAETFRTEKSKVFPEDHEPWSKRILDPGSKIVLKWNRVFICSCLLALFVDPLYLYLPALVGNGQSSCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDSKMIAKRYIRSDFFVDLIATLPLPQIVIWFIIPATRSRLTDHKNNALALIVLLQFIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGATWYLLSVDRYTSCWKSFCRKKEYNPLECNLTFFDCDTFNLNDRNSWANSTLVFDKCGPDGIFKYGIFGNAMSKNVVSSSFIEKYFYCLWWGLQNLSSYGQNLETTTFIGETLFAVLIAILGLVLFAHLIGNMQTYLQSLTVRLEEWRLKRRDTEEWMRHRQLPEDLKGRVRRFVQYKWVATRGVDEEAILQSLPADLRRDIQCHLCLDLVRRVPFFAQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFIIRGRLESSTTNGGRSGFFNSIMLRPGDFCGEELLSWALNPKSTANLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMAKDLLMKESFILSEKVADETGQGGEQFSVVSNPSQTKMYLDVTLLASRFAANTRRGVQRMKDDMPKLQKPDEPDFSIEPDR 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68010666 68017449 + Tan0019822.1 Tan09g1637 763980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1637 729 Pfam Ion transport protein 97 420 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g1637 729 MobiDBLite consensus disorder prediction 704 729 - -
Tan09g1637 729 SUPERFAMILY cAMP-binding domain-like 423 615 IPR018490 -
Tan09g1637 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 709 - -
Tan09g1637 729 Gene3D - 120 418 - -
Tan09g1637 729 SMART cnmp_10 493 624 IPR000595 -
Tan09g1637 729 ProSiteProfiles cAMP/cGMP binding motif profile. 493 576 IPR000595 -
Tan09g1637 729 Pfam Cyclic nucleotide-binding domain 516 605 IPR000595 -
Tan09g1637 729 Gene3D Jelly Rolls 491 611 IPR014710 -
Tan09g1637 729 CDD CAP_ED 493 624 IPR000595 -
Tan09g1637 729 SUPERFAMILY Voltage-gated potassium channels 88 415 - -
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 406 415 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 388 399 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 456 463 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 271 281 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 154 163 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 PRINTS EAG/ELK/ERG potassium channel family signature 362 379 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan09g1637 729 FunFam Cyclic nucleotide-gated ion channel 1 420 484 - -
Tan09g1637 729 Gene3D Helix hairpin bin 421 484 - -
Tan09g1637 729 FunFam Cyclic nucleotide-gated ion channel 1 491 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3746 Tan-Chr1:102224142 Tan09g1637 Tan-Chr9:68010666 3.60E-275 dispersed
Tan01g3748 Tan-Chr1:102270451 Tan09g1637 Tan-Chr9:68010666 1.30E-239 dispersed
Tan03g1076 Tan-Chr3:66968446 Tan09g1637 Tan-Chr9:68010666 1.00E-145 dispersed
Tan05g0241 Tan-Chr5:1824058 Tan09g1637 Tan-Chr9:68010666 2.60E-214 dispersed
Tan08g0726 Tan-Chr8:7495317 Tan09g1637 Tan-Chr9:68010666 6.80E-205 dispersed
Tan08g0727 Tan-Chr8:7495317 Tan09g1637 Tan-Chr9:68010666 6.80E-205 dispersed
Tan09g1637 Tan-Chr9:68010666 Tan09g2232 Tan-Chr9:72293772 4.80E-235 dispersed
Tan09g1637 Tan-Chr9:68010666 Tan07g1336 Tan-Chr7:62795370 4.20E-247 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1637 K27629 - csv:101218643 1394.79