Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1672 | ATGCCACTAATGAATGCCGCCTGGCCATTCCAAAAGAAAGATTCTGTTTATGCGTCACGTTTTGGTTGGTTGAACTCGACCGGATACCTCAACGAGGAAGCGGCCACGAGGGGCATAATCGACGAAGACGGATGGCTGCACACCGGCGACATACGTTTCGTCGACGACTACGACGAGGTCTTTATCGTCGATCGTCTCAAGGAACTGATCAAATACAAGAGCTTCCAGGTGGCGCCGGCGGAGTTGGAAGCCCTGCTGATTTCCCACAATCACATCGCCGACGCTGCGGTTATCCCTTTGAAAAATGATGTTGCGGGAGAAGTATCGGTTGCGTTCATTGTCCGATCCGACGGGTTCAACATCACCGAGGATGAAATTAAGCAATACATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGTGTCTTCTTCGCGGAATCCATCCCTAAATGTCCTTCGGGCAAAATCTTGCAGAGACAACTTAGAGCTTTGCTCCCAGCCAGTGTTCCAAATTAG | 519 | 49.33 | MPLMNAAWPFQKKDSVYASRFGWLNSTGYLNEEAATRGIIDEDGWLHTGDIRFVDDYDEVFIVDRLKELIKYKSFQVAPAELEALLISHNHIADAAVIPLKNDVAGEVSVAFIVRSDGFNITEDEIKQYISKQVVFYKRINRVFFAESIPKCPSGKILQRQLRALLPASVPN | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 68366480 | 68367795 | - | Tan0003369.1 | Tan09g1672 | 764015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1672 | 172 | Gene3D | - | 23 | 67 | IPR042099 | - | |
Tan09g1672 | 172 | FunFam | 4-coumarate--CoA ligase 2 | 68 | 169 | - | - | |
Tan09g1672 | 172 | PANTHER | LONG-CHAIN-FATTY-ACID--COA LIGASE | 27 | 163 | - | GO:0016405(PANTHER) | |
Tan09g1672 | 172 | Pfam | AMP-binding enzyme C-terminal domain | 81 | 156 | IPR025110 | - | |
Tan09g1672 | 172 | Gene3D | - | 68 | 168 | IPR045851 | - | |
Tan09g1672 | 172 | SUPERFAMILY | Acetyl-CoA synthetase-like | 26 | 166 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g1672 | Tan-Chr9:68366480 | Tan09g1675 | Tan-Chr9:68378870 | 2.80E-69 | dispersed | |
Tan09g1672 | Tan-Chr9:68366480 | Tan09g1673 | Tan-Chr9:68366854 | 3.20E-73 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1672 | K01904 | - | csv:101218077 | 237.654 |