Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1672 ATGCCACTAATGAATGCCGCCTGGCCATTCCAAAAGAAAGATTCTGTTTATGCGTCACGTTTTGGTTGGTTGAACTCGACCGGATACCTCAACGAGGAAGCGGCCACGAGGGGCATAATCGACGAAGACGGATGGCTGCACACCGGCGACATACGTTTCGTCGACGACTACGACGAGGTCTTTATCGTCGATCGTCTCAAGGAACTGATCAAATACAAGAGCTTCCAGGTGGCGCCGGCGGAGTTGGAAGCCCTGCTGATTTCCCACAATCACATCGCCGACGCTGCGGTTATCCCTTTGAAAAATGATGTTGCGGGAGAAGTATCGGTTGCGTTCATTGTCCGATCCGACGGGTTCAACATCACCGAGGATGAAATTAAGCAATACATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGTGTCTTCTTCGCGGAATCCATCCCTAAATGTCCTTCGGGCAAAATCTTGCAGAGACAACTTAGAGCTTTGCTCCCAGCCAGTGTTCCAAATTAG 519 49.33 MPLMNAAWPFQKKDSVYASRFGWLNSTGYLNEEAATRGIIDEDGWLHTGDIRFVDDYDEVFIVDRLKELIKYKSFQVAPAELEALLISHNHIADAAVIPLKNDVAGEVSVAFIVRSDGFNITEDEIKQYISKQVVFYKRINRVFFAESIPKCPSGKILQRQLRALLPASVPN 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68366480 68367795 - Tan0003369.1 Tan09g1672 764015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1672 172 Gene3D - 23 67 IPR042099 -
Tan09g1672 172 FunFam 4-coumarate--CoA ligase 2 68 169 - -
Tan09g1672 172 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 163 - GO:0016405(PANTHER)
Tan09g1672 172 Pfam AMP-binding enzyme C-terminal domain 81 156 IPR025110 -
Tan09g1672 172 Gene3D - 68 168 IPR045851 -
Tan09g1672 172 SUPERFAMILY Acetyl-CoA synthetase-like 26 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1672 Tan-Chr9:68366480 Tan09g1675 Tan-Chr9:68378870 2.80E-69 dispersed
Tan09g1672 Tan-Chr9:68366480 Tan09g1673 Tan-Chr9:68366854 3.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1672 K01904 - csv:101218077 237.654