Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1675 ATGGCGACAGCCGATCCGTCACCGGAATTCATATTCCGGTCAAAACTCCCGGACATCACCATCCCGAACCACCTCCCCTTACACACATACTGCTTCGAAAAGATCTCCGAATTCAAACACCGTCCATGTCTAATCAACGGCGCCACCGGCGACACCTACACCTTCGGTGAAGTTCACGCAACATCCCGCCGAGTGGCCGCCGGCCTCCACAAGCTCGGCATCGGAAAAGGAGACGTCATCATGCTCCTCCTCCAAAACAGCCCACAGTTCGTCTTAGCCTTCCTCGGCGCCTCCTATATCGGCGGCACCGCCACGATGGCGAACCCGTTCTTCACGGTGCCGGAGATCGCCAAACAGGCCGCGTCCTCGGGCGCCAAGCTGATCATAACCCAAGCCGCGTTCGCGGAGAAAGTGAAAAACCTCCGTGACGAAAACGGCGTGAGGATCAAACTCATATTCATCGACCCTCCACCGGAGGGAGAATCTCACTTCTCGGTGCTGAGTGATAAGGAAAAAGAGGAGGAAATGCCAGACGTGAAAATCAGTCCAAACGACGTCGTTGCGCTGCCTTATTCGTCGGGGACAACGGGTCTCCCAAAAGGAGTGATGCTGACTCATCAAGGATTGGTGACCAGCGTGGCGCAACAAGTGGACGGTGAAAATCCGCACCTGTATATACGAAGCGACGACGTCGTTTTATGCGTGCTCCCTCTGTTTCACATCTATTCGCTGAACTCGATCATGATGTGTTCGTTGCGTGTGGGAGCGGCGATTTTGATCGTACAGAAATTCGAGATTAATTCAATTGTGGAGTTGGTGCCGAAATATAAGGTGACGATTGCGCCGTTCGTGCCGCCGATTGTATTGGCAATTGCGAAGAGTCCGGCAGTGGAGCGTTCCGACATGTCGTCGATACGGATGGTGTTATCGGGAGCGGCGCCGCTGGGGAAGGAGCTTGAAGATGCGTTTAGAGCCAAGCTTCCGCATGCGATTTTGGGGCAGGGATATGGAATGACGGAGGCGGGTTCGGTGTTGACGATGTCGTTGTCGTTTGCAAAGGAGAGGTTCGAGATAATTAAATCGGGAGGTTGTGGTACGGTGATGAGAAATTCAGAGATGAAGATTGTAGACCCTCAAACGGGAGCTTCTCTTCCAAGGAATCAACCTGGGGAGATTTTTATTCGAAGCCCTCAGATGATGAAAGGATACCTCAACGACGAAGAGGCCACAAAGGGCATAATCGACGCAGACGGATGGCTGCACACCGGCGACATAGGTTTCGTCGACGACTACGACGAGGTCTTCATCATCGATCGTCTCAAAGAACTGATCAAGTACAAAGGCTTCCAGGTGGCGCCGGCGGAGTTGGAAGCCCTGCTGATTTCCCACAGTCACATCGCCGACGCTGCGGTTATCCCTATGAAAAATGAAGTTGCGGGCGAGGTACCGGTTGCGTTCATTGTCCGATCCGACGGTTTCAACATCACCGAGGATGAAATTAAGCAATACGTCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGTGTCTTCTTCGTGGATTCCATCCCTAAAAGTCCTTCTGGCAAAATCTTGCGGAGGCAACTTAGAGCTTTGCTAGCAGCCAGTACTCCAAATTAG 1641 52.41 MATADPSPEFIFRSKLPDITIPNHLPLHTYCFEKISEFKHRPCLINGATGDTYTFGEVHATSRRVAAGLHKLGIGKGDVIMLLLQNSPQFVLAFLGASYIGGTATMANPFFTVPEIAKQAASSGAKLIITQAAFAEKVKNLRDENGVRIKLIFIDPPPEGESHFSVLSDKEKEEEMPDVKISPNDVVALPYSSGTTGLPKGVMLTHQGLVTSVAQQVDGENPHLYIRSDDVVLCVLPLFHIYSLNSIMMCSLRVGAAILIVQKFEINSIVELVPKYKVTIAPFVPPIVLAIAKSPAVERSDMSSIRMVLSGAAPLGKELEDAFRAKLPHAILGQGYGMTEAGSVLTMSLSFAKERFEIIKSGGCGTVMRNSEMKIVDPQTGASLPRNQPGEIFIRSPQMMKGYLNDEEATKGIIDADGWLHTGDIGFVDDYDEVFIIDRLKELIKYKGFQVAPAELEALLISHSHIADAAVIPMKNEVAGEVPVAFIVRSDGFNITEDEIKQYVSKQVVFYKRINRVFFVDSIPKSPSGKILRRQLRALLAASTPN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68378870 68384986 - Tan0017791.1 Tan09g1675 764018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1675 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - GO:0016405(PANTHER)
Tan09g1675 546 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Tan09g1675 546 Gene3D - 441 543 IPR045851 -
Tan09g1675 546 Gene3D - 4 440 IPR042099 -
Tan09g1675 546 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 441 - -
Tan09g1675 546 SUPERFAMILY Acetyl-CoA synthetase-like 11 542 - -
Tan09g1675 546 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Tan09g1675 546 CDD 4CL 21 536 - -
Tan09g1675 546 Pfam AMP-binding enzyme 34 404 IPR000873 -
Tan09g1675 546 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0791 Tan-Chr8:8784211 Tan09g1675 Tan-Chr9:68378870 1.00E-205 dispersed
Tan08g1857 Tan-Chr8:70812704 Tan09g1675 Tan-Chr9:68378870 1.30E-99 dispersed
Tan08g1858 Tan-Chr8:70812704 Tan09g1675 Tan-Chr9:68378870 4.90E-71 dispersed
Tan09g1672 Tan-Chr9:68366480 Tan09g1675 Tan-Chr9:68378870 2.80E-69 dispersed
Tan09g1675 Tan-Chr9:68378870 Tan10g0861 Tan-Chr10:7183516 4.20E-26 dispersed
Tan09g1673 Tan-Chr9:68366854 Tan09g1675 Tan-Chr9:68378870 1.60E-50 proximal
Tan08g0792 Tan-Chr8:8784211 Tan09g1675 Tan-Chr9:68378870 1.70E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1675 K01904 - csv:101218077 869.766