Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1693 | ATGAACTCTTCTTCTTCTTCTTCATCTTCTTCTTCTCCAAATTGGCTGGCTTTCTCTCTCTCTAACAATCCCAACTCTCTCTCTCTCTACCATCATCCTAATCCTCCTGATCTCTCTATCTTCTCCCCCAAGCTCGAGGACTTTCTCCGGGGATCACCTACTCCCCCTCCGCCGCCGTCCTTTCACTTCTCTCCCCATCAAACTCCAGCCACTTTTTCTGATCAATCTCAGCTCTGTGATTCTGATCTCAAAACCATCGCCGCTAGTTTCCTCCGTGGACCTCCCACTCCCTTGCCCCTCCACGCGCCGCCGCAGCACCCTCCTCAGCCTGATACCCCACCGCCGCCACCCAAGAAGGCCGTTGATACTTTTGGCCAACGTACCTCCATCTACCGCGGTGTTACAAGGCATAGATGGACTGGTCGATATGAAGCTCATTTGTGGGATAACAGTTGCAGAAGAGAGGGTCAGAGTAGAAAAGGAAGACAAGTTTATTTGGGTGGTTATGACAAAGAAGAAAAAGCAGCTAGAGCTTATGATCTCGCTGCTCTCAAATACTGGGGTCCGACCACCACCACCAACTTTCCGGTGTCGGATTACGAAAAAGAGCTGGAGGATATGAAGAACATGACTAGACAAGAATTTGTTGCTTCATTAAGAAGGAAAAGCAGCGGTTTTTCTAGAGGAGCTTCTATTTACAGAGGTGTAACAAGGCACCACCAACATGGCAGATGGCAAGCAAGAATCGGAAGGGTTGCTGGCAACAAAGATCTCTACCTTGGAACATTCAGCACTCAGGAAGAAGCAGCCGAGGCGTATGACATTGCAGCCATCAAATTCCGAGGCCTCAATGCAGTCACCAACTTCGACATCAGTCGCTACGACGTAAAGAGCATTGCAAGCAGCAACCTCCCCATCGGAGGGATGTCGGGCACCAAATCGAAAACCGCCTCCGACTCTGCTGCCTCCGATGGAGGCAGCCGATCAACCGAAGAACGCGACGTACACCATTCTCCTGCGTCCTCCACCGTGAATTACATTTCGTCTCAGTCCAACAACTCAACTCTAAGCTTCGCAATGCCCATCAAACCGGACCCATCGTCCGATCAATACTGGTCCTTGCTCGGCTACCACCCCAGCACCTTCAACACAAACCTCCCCAAACCCGACAACATTCCACCGCCACCGTCATCGTCATCGTCATTGACAATGTTTCAACAATCTTCAAACACCGGATCCACAATGTTTTCCGCCATCCCCGACCTACCTTCGAGCGGTCCACCACTCTCCGAAGGTGGTGATGTATATGACGGTGTTTACGTCCAACAACAATATGCAACACCAATTGCATTGAGTAGCGGAATAAGCATTGAGATGGGGCAATCAATGAGGGGGTTCGAAGCTCATGCAAAACCAAGCCTTTTTCAAACGCCAATATTTGGAATAGAATGA | 1452 | 50.0 | MNSSSSSSSSSSPNWLAFSLSNNPNSLSLYHHPNPPDLSIFSPKLEDFLRGSPTPPPPPSFHFSPHQTPATFSDQSQLCDSDLKTIAASFLRGPPTPLPLHAPPQHPPQPDTPPPPPKKAVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSDYEKELEDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASSNLPIGGMSGTKSKTASDSAASDGGSRSTEERDVHHSPASSTVNYISSQSNNSTLSFAMPIKPDPSSDQYWSLLGYHPSTFNTNLPKPDNIPPPPSSSSSLTMFQQSSNTGSTMFSAIPDLPSSGPPLSEGGDVYDGVYVQQQYATPIALSSGISIEMGQSMRGFEAHAKPSLFQTPIFGIE | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 68529824 | 68533442 | + | Tan0005268.1 | Tan09g1693 | 764036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1693 | 483 | CDD | AP2 | 231 | 292 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | ProSiteProfiles | AP2/ERF domain profile. | 130 | 196 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 96 | 120 | - | - | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 384 | 407 | - | - | |
Tan09g1693 | 483 | SUPERFAMILY | DNA-binding domain | 231 | 292 | IPR016177 | GO:0003677(InterPro) | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 90 | 123 | - | - | |
Tan09g1693 | 483 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 39 | 350 | - | - | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 50 | 64 | - | - | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 26 | 77 | - | - | |
Tan09g1693 | 483 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 129 | 198 | - | - | |
Tan09g1693 | 483 | Gene3D | AP2/ERF domain | 130 | 198 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | Gene3D | AP2/ERF domain | 232 | 292 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | SMART | rav1_2 | 232 | 296 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | SMART | rav1_2 | 130 | 202 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 305 | 325 | - | - | |
Tan09g1693 | 483 | SUPERFAMILY | DNA-binding domain | 129 | 198 | IPR016177 | GO:0003677(InterPro) | |
Tan09g1693 | 483 | CDD | AP2 | 129 | 198 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | FunFam | AP2-like ethylene-responsive transcription factor | 231 | 292 | - | - | |
Tan09g1693 | 483 | MobiDBLite | consensus disorder prediction | 305 | 348 | - | - | |
Tan09g1693 | 483 | ProSiteProfiles | AP2/ERF domain profile. | 232 | 290 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | Pfam | AP2 domain | 131 | 188 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | Pfam | AP2 domain | 233 | 282 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | PRINTS | Ethylene responsive element binding protein signature | 272 | 292 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan09g1693 | 483 | PRINTS | Ethylene responsive element binding protein signature | 131 | 142 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0731 | Tan-Chr7:11708920 | Tan09g1693 | Tan-Chr9:68529824 | 5.80E-98 | dispersed | |
Tan09g1597 | Tan-Chr9:67738656 | Tan09g1693 | Tan-Chr9:68529824 | 9.80E-72 | dispersed | |
Tan09g1693 | Tan-Chr9:68529824 | Tan10g1640 | Tan-Chr10:31967562 | 1.50E-46 | dispersed | |
Tan09g1693 | Tan-Chr9:68529824 | Tan08g1184 | Tan-Chr8:28966042 | 5.60E-99 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28370 | PF00847 | AP2 | 3.50E-13 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1693 | K09285 | - | csv:101210453 | 585.874 |