Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1728 ATGAGAGGTTCTGGAAGGAGATTGACCCAGAAAGAATCTGGCAAATGTTCTCACTCCAAGGTGGAAAATGGATCAGAATTGATCTTACCTCTGAAGTTGAAAAGGTGTAGCAAAATATCCCATTCCAAACAGAAAAAATCAAAAACGAAATCACATGCACAGGCAATTGGTTCAACATTGAAGAGGAGACCTGTTCCTAAATCCTTGAGCAAGGGGAATAAAAATGTGACAATTAGACAACTGGCTGGTAAAAAATTTCTGCTAAAAAGATTTGATTCAAAATCTTCCAAGGAGTTACTTTTGTCTAAGCTTCAAGGTGGAAAATCCCTGCCATCGACTAGTACGAAAGGGAATGAGCCGGTGGCCAAGATAAACCAACAAAGGAAAAGGAGGAAGAACAAAGGAAAAAAGGAAAAAGTGGAGTTAGATGAAGCTTCTCGCCTACAGAGGAGAACAAGATACCTAATAATTAAAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAAATTAAGCCAGAAAAGGAACTCCAAAGAGCCATGAAGCAGATATTAAAGTGCAAACTTGGAATCCGTGATGCTATTCGCCAGCTGGATTTGCTTGGTTCAGTAGGATGCATTGAAGACTCTGTTATTGGTCCTGATGGATCTGTCTACCACGAACATATATTCTGTGCAAAATGCAAGTTGCGTGAAGCTTTTCCAGACAATGACATTATACTTTGCGATGGGACATGCAACTGTGCTTTTCACCAAAAATGTCTGGATCCACCATTAGACACGGAGAATATTCCTCCTGGAGACCAGGGTTGGTTTTGTAAATTTTGTGAGTGCAAGATGGAAATATTAGAAGGAATGAATGCACATCTTGGTACTCGGTTCTCAATGAACATTAGTTGGGAGGACATTTTCAAAGAAGAAGCTGCTTTCCCAGATGGTGGTAATGCATTGCATAATCATGAGGAAGAGTGGCCCTCAGATGATTCTGCGGATGATGACTATGATCCAGATAAGAAGGAGAATGGCTACGACAACCAAAGCGGGGAAGAAAATGATAAGGATGTTTTGGAGGAGTCGAGTAGTTCAACCAGCTTGAGTTGGTCTTTAGATGGCGAGGATTTAGCTGATAGAGATGGTATTGGATGTGAAGATCACTTTGGTGTTAGCAGCAGCATAGTTTCTGATGGCTCCATTGAAGAGGGTATCACATGTGGCCGTCGGCAGCGGCAAGCTGTTGATTATAAAAAGTTATATGTCGAAATGTTTGGAAAGGATGCTCCAGCTCAAGAACAAGTTAGTGAAGATGAGGACTGGGGACCTGCAAAAAGAAGACGGAGAGAAAAGGAATGTGATGCTGCGAGTACTCTTATGTCCCTTTGTGAAAGCGAAAAAAAGAGTGAAGACATTGACATGGAAGCAGAGAAGAAACTTCTCAATTTGCAAAGTAGATCGTTTTTCAGAATTCCTCGTTATGCAGTTGAGAAACTTCGCCAAGTGTTTGCTGATAATGAACTTCCCTCTAGAGATGTCAAGGAGAACCTTTCAAAAGAATTGGGTCTTGATGCTGAAAAGGTCAGCAAATGGTTCAAGAATGCACGATATTCTGCCCTAAGAACTAGAAAGGCAGAGGGAGCAACAAAATCCCATAGTCCTAATAAGACTTCCAATGAGTCCAGATTAGCAGATTCAAAGGAAATGGCTGCAAATCTTCTTTCATCAGAGGACGCACCAATAAAAGAACTGCAGCGGAAATGGCACAATAGTCATTACAAGAAAAACCAGCACAGAAAATCATCACTTGTATCTTCCAACAATAACAAGGGTGCTTTTGAGTTTGGTGATGATATAAGCTTGAAGAATCTCCTAAAGAATAGAAAAACAAAGGTACAGAAGAGGGTTAAATTTGTAGCTAGAGGTGGAGGTCAAGAAGCAGAAGTGGAGATGGAGAGACTGTGTAAAATTAAGGGTAGATTAGAGATAATGAAGCAGAAATTACTTAGACTATCAAATAAGAAAGATGAAGGGATTTTAGATAGGTCACACTTGTTTGGACAGTCTATTGTATATGTTCCTGTGGCAGTGTTAAAGGAAAAGCTTTGA 2133 40.46 MRGSGRRLTQKESGKCSHSKVENGSELILPLKLKRCSKISHSKQKKSKTKSHAQAIGSTLKRRPVPKSLSKGNKNVTIRQLAGKKFLLKRFDSKSSKELLLSKLQGGKSLPSTSTKGNEPVAKINQQRKRRKNKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRAMKQILKCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEGMNAHLGTRFSMNISWEDIFKEEAAFPDGGNALHNHEEEWPSDDSADDDYDPDKKENGYDNQSGEENDKDVLEESSSSTSLSWSLDGEDLADRDGIGCEDHFGVSSSIVSDGSIEEGITCGRRQRQAVDYKKLYVEMFGKDAPAQEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKKSEDIDMEAEKKLLNLQSRSFFRIPRYAVEKLRQVFADNELPSRDVKENLSKELGLDAEKVSKWFKNARYSALRTRKAEGATKSHSPNKTSNESRLADSKEMAANLLSSEDAPIKELQRKWHNSHYKKNQHRKSSLVSSNNNKGAFEFGDDISLKNLLKNRKTKVQKRVKFVARGGGQEAEVEMERLCKIKGRLEIMKQKLLRLSNKKDEGILDRSHLFGQSIVYVPVAVLKEKL 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68817191 68827196 + Tan0001027.2 Tan09g1728 764071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1728 710 ProSiteProfiles Zinc finger PHD-type profile. 233 290 IPR019787 -
Tan09g1728 710 MobiDBLite consensus disorder prediction 322 381 - -
Tan09g1728 710 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 32 704 - GO:0003677(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0006325(PANTHER)|GO:0006355(PANTHER)
Tan09g1728 710 FunFam pathogenesis-related homeodomain protein-like 227 287 - -
Tan09g1728 710 ProSiteProfiles 'Homeobox' domain profile. 490 550 IPR001356 GO:0003677(InterPro)
Tan09g1728 710 CDD PHD_PRHA_like 235 287 IPR045876 -
Tan09g1728 710 CDD homeodomain 498 551 IPR001356 GO:0003677(InterPro)
Tan09g1728 710 MobiDBLite consensus disorder prediction 1 19 - -
Tan09g1728 710 MobiDBLite consensus disorder prediction 440 457 - -
Tan09g1728 710 Pfam PHD-finger 236 287 IPR019787 -
Tan09g1728 710 MobiDBLite consensus disorder prediction 106 144 - -
Tan09g1728 710 MobiDBLite consensus disorder prediction 346 368 - -
Tan09g1728 710 MobiDBLite consensus disorder prediction 37 74 - -
Tan09g1728 710 Pfam Homeodomain 501 545 IPR001356 GO:0003677(InterPro)
Tan09g1728 710 Gene3D - 493 564 - -
Tan09g1728 710 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 284 IPR013083 -
Tan09g1728 710 SUPERFAMILY FYVE/PHD zinc finger 226 293 IPR011011 -
Tan09g1728 710 FunFam pathogenesis-related homeodomain protein 492 556 - -
Tan09g1728 710 MobiDBLite consensus disorder prediction 437 457 - -
Tan09g1728 710 MobiDBLite consensus disorder prediction 106 122 - -
Tan09g1728 710 SUPERFAMILY Homeodomain-like 494 554 IPR009057 -
Tan09g1728 710 MobiDBLite consensus disorder prediction 1 23 - -
Tan09g1728 710 SMART PHD_3 235 288 IPR001965 -
Tan09g1728 710 MobiDBLite consensus disorder prediction 550 574 - -
Tan09g1728 710 ProSitePatterns Zinc finger PHD-type signature. 236 287 IPR019786 -
Tan09g1728 710 SMART HOX_1 492 554 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1727 Tan-Chr9:68817191 Tan09g1728 Tan-Chr9:68817191 0.00E+00 tandem
Tan09g1728 Tan-Chr9:68817191 Tan09g1729 Tan-Chr9:68817191 1.50E-305 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28372 PF00628 PHD 9.50E-10 CL0390 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1728 - - - 0.0