Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1736 ATGGACAGTATCGGAGAGGATTACATGACTTACTTGGGGAATAGCATGTTCATAGCCGATGAGATCGACAGTTGGGGATTCGACGAGCCGGTTTCCGGTTACTATGATTCGAGTTCGCCGGAGGGAGTGGCTTCGAAGAACATAGTATCGGAGAGGAATAGGAGGAGGAAGCTCAACGAGAGGCTTTTTGCACTTCGATCGGTCGTTCCTAATATTACTAAGATGGATAAGGCTTCCATTATAAAAGATGCAATCGATTACATCCAAGATTTGCATGAACAAGAGAGGAGGATTCAAGCTGAAATCTATGAGCTCGAATCAGGAAAGTTGAATAAGATAACAGGGTATGAGTTTGACCAGGAGCTGCCATTCTTGCTCAGATCAAAGAGGAAGAAAACAGAGCAGTTCAGCTATGATTCTCCTGCTTCAAGAACTTCCCCCATTGAAGTTCTGGATCTGAGTGTAACATATATGGGGGAAAGAACAATGGTAGTGAGCTTGACATGTTGTAAAAGAGCAGATTCAATGGTTAAACTATGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTACTGCTGTCTCTGGAAGGCTTTTGAAAACTGTCTTCATTGAGGTAACTAAACTACCCTCTCTCTCTCTTTTTCTTACAAGAAATTCAAAACAAATTGAAACTGGGGCTTCTCTTTTGGTTTTAGTGCTTGAAGTGTTTTGTTTGATTCTTCCCCAAACCTGTTCAAATGGATAA 759 41.24 MDSIGEDYMTYLGNSMFIADEIDSWGFDEPVSGYYDSSSPEGVASKNIVSERNRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRIQAEIYELESGKLNKITGYEFDQELPFLLRSKRKKTEQFSYDSPASRTSPIEVLDLSVTYMGERTMVVSLTCCKRADSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEVTKLPSLSLFLTRNSKQIETGASLLVLVLEVFCLILPQTCSNG 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68878886 68881751 - Tan0016109.1 Tan09g1736 764079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1736 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 91 IPR011598 GO:0046983(InterPro)
Tan09g1736 252 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 39 109 - -
Tan09g1736 252 Gene3D - 40 108 IPR036638 GO:0046983(InterPro)
Tan09g1736 252 Pfam Helix-loop-helix DNA-binding domain 48 92 IPR011598 GO:0046983(InterPro)
Tan09g1736 252 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 40 215 IPR051358 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan09g1736 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 106 IPR036638 GO:0046983(InterPro)
Tan09g1736 252 SMART finulus 48 97 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0045 Tan-Chr7:2562406 Tan09g1736 Tan-Chr9:68878886 1.80E-13 dispersed
Tan09g1736 Tan-Chr9:68878886 Tan10g0111 Tan-Chr10:1311704 2.20E-09 dispersed
Tan05g0199 Tan-Chr5:1560256 Tan09g1736 Tan-Chr9:68878886 3.10E-18 transposed
Tan08g0898 Tan-Chr8:11974965 Tan09g1736 Tan-Chr9:68878886 4.30E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28374 PF00010 HLH 5.70E-12 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1736 - - - 0.0