Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1736 | ATGGACAGTATCGGAGAGGATTACATGACTTACTTGGGGAATAGCATGTTCATAGCCGATGAGATCGACAGTTGGGGATTCGACGAGCCGGTTTCCGGTTACTATGATTCGAGTTCGCCGGAGGGAGTGGCTTCGAAGAACATAGTATCGGAGAGGAATAGGAGGAGGAAGCTCAACGAGAGGCTTTTTGCACTTCGATCGGTCGTTCCTAATATTACTAAGATGGATAAGGCTTCCATTATAAAAGATGCAATCGATTACATCCAAGATTTGCATGAACAAGAGAGGAGGATTCAAGCTGAAATCTATGAGCTCGAATCAGGAAAGTTGAATAAGATAACAGGGTATGAGTTTGACCAGGAGCTGCCATTCTTGCTCAGATCAAAGAGGAAGAAAACAGAGCAGTTCAGCTATGATTCTCCTGCTTCAAGAACTTCCCCCATTGAAGTTCTGGATCTGAGTGTAACATATATGGGGGAAAGAACAATGGTAGTGAGCTTGACATGTTGTAAAAGAGCAGATTCAATGGTTAAACTATGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTACTGCTGTCTCTGGAAGGCTTTTGAAAACTGTCTTCATTGAGGTAACTAAACTACCCTCTCTCTCTCTTTTTCTTACAAGAAATTCAAAACAAATTGAAACTGGGGCTTCTCTTTTGGTTTTAGTGCTTGAAGTGTTTTGTTTGATTCTTCCCCAAACCTGTTCAAATGGATAA | 759 | 41.24 | MDSIGEDYMTYLGNSMFIADEIDSWGFDEPVSGYYDSSSPEGVASKNIVSERNRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRIQAEIYELESGKLNKITGYEFDQELPFLLRSKRKKTEQFSYDSPASRTSPIEVLDLSVTYMGERTMVVSLTCCKRADSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEVTKLPSLSLFLTRNSKQIETGASLLVLVLEVFCLILPQTCSNG | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 68878886 | 68881751 | - | Tan0016109.1 | Tan09g1736 | 764079 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1736 | 252 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 42 | 91 | IPR011598 | GO:0046983(InterPro) | |
Tan09g1736 | 252 | FunFam | Basic helix-loop-helix (BHLH) DNA-binding superfamily protein | 39 | 109 | - | - | |
Tan09g1736 | 252 | Gene3D | - | 40 | 108 | IPR036638 | GO:0046983(InterPro) | |
Tan09g1736 | 252 | Pfam | Helix-loop-helix DNA-binding domain | 48 | 92 | IPR011598 | GO:0046983(InterPro) | |
Tan09g1736 | 252 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 40 | 215 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Tan09g1736 | 252 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 41 | 106 | IPR036638 | GO:0046983(InterPro) | |
Tan09g1736 | 252 | SMART | finulus | 48 | 97 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0045 | Tan-Chr7:2562406 | Tan09g1736 | Tan-Chr9:68878886 | 1.80E-13 | dispersed | |
Tan09g1736 | Tan-Chr9:68878886 | Tan10g0111 | Tan-Chr10:1311704 | 2.20E-09 | dispersed | |
Tan05g0199 | Tan-Chr5:1560256 | Tan09g1736 | Tan-Chr9:68878886 | 3.10E-18 | transposed | |
Tan08g0898 | Tan-Chr8:11974965 | Tan09g1736 | Tan-Chr9:68878886 | 4.30E-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28374 | PF00010 | HLH | 5.70E-12 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1736 | - | - | - | 0.0 |