Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1752 ATGGCCGTCGACCTCGCAGCGTTTCCGGCCACCATCGACGACCAAATCGCCATTCAAGAAGCCGCCTCCGCCGGTTTGCAGAGCATGGAGCATCTAATCCGCCTCTTATCCAAACAACAACCCTCTCAGAAAACCCCTAATCTCGATTGCTCTGAAGTCACCGATTTCACCGTCTCCAAATTCAAGCGAGTAATCTCCCTCCTCAACCGCACCGGCCACGCTCGGTTCCGTCGCGGCCCTTCCTCTGCTTCCGATTCCCCTAATCCCGTCCTCAACTCTCTCGATCCGCCTCCCAATTCCTCCGCAATCAATTTCTTTAAACCTAATATCACCCCCGCCGCGAAATCGCCCGATTCTAGGGCTCCGACTGAGTCTACTACGACCTCCTCTTTCGTGTCCACGATCACCGGCGACGGCAGCGTTTCCAACGGGAAGCTTGGTCTGTCACTCTATACGCCGGCGGTGGCGGCGGTTTCCTCCGGAAAACCGCCGCTGTCAACGAAAAGGAAGTGCGATGATAGCTCACGATTTGGTTGCAAGATCAATTCCAAGGCGTGTCACTGTGCGAAACGAAGGAAATCGGGAGTGAAGAAGACCGTACGAGTTCCGGCGATCAGTTCTAAAATTGCCGATATACCTTCCGATGAATACTCTTGGAGAAAGTACGGCCAAAAACCCATCAAAGGCTCTCCCTACCCTAGAGGATATTACAGATGCAGCACCGTGAAAGGATGTCCGGCGAGGAAAAAAGTGGAAAGAGCTCGTGACGATCCGACGATGCTCCTCGTAACTTACGACGGAGATCACTGTCACCCGCCGGCTACGGTGACCGATGCCGGCGTGGGCTTGTCTTGA 855 54.5 MAVDLAAFPATIDDQIAIQEAASAGLQSMEHLIRLLSKQQPSQKTPNLDCSEVTDFTVSKFKRVISLLNRTGHARFRRGPSSASDSPNPVLNSLDPPPNSSAINFFKPNITPAAKSPDSRAPTESTTTSSFVSTITGDGSVSNGKLGLSLYTPAVAAVSSGKPPLSTKRKCDDSSRFGCKINSKACHCAKRRKSGVKKTVRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYRCSTVKGCPARKKVERARDDPTMLLVTYDGDHCHPPATVTDAGVGLS 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69067801 69069881 + Tan0018109.1 Tan09g1752 764095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1752 284 Gene3D WRKY domain 201 274 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1752 284 MobiDBLite consensus disorder prediction 81 107 - -
Tan09g1752 284 MobiDBLite consensus disorder prediction 116 131 - -
Tan09g1752 284 Pfam Plant zinc cluster domain 168 211 IPR018872 -
Tan09g1752 284 SUPERFAMILY WRKY DNA-binding domain 211 273 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1752 284 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1752 284 MobiDBLite consensus disorder prediction 75 131 - -
Tan09g1752 284 SMART WRKY_cls 213 273 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1752 284 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 276 IPR044810 GO:0003700(InterPro)
Tan09g1752 284 FunFam WRKY transcription factor 65 197 274 - -
Tan09g1752 284 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3739 Tan-Chr1:102159890 Tan09g1752 Tan-Chr9:69067801 4.60E-79 dispersed
Tan05g1563 Tan-Chr5:34512686 Tan09g1752 Tan-Chr9:69067801 1.10E-52 dispersed
Tan05g1564 Tan-Chr5:34512686 Tan09g1752 Tan-Chr9:69067801 8.50E-32 dispersed
Tan06g1706 Tan-Chr6:32084807 Tan09g1752 Tan-Chr9:69067801 6.10E-14 dispersed
Tan07g2261 Tan-Chr7:74010122 Tan09g1752 Tan-Chr9:69067801 5.40E-40 dispersed
Tan07g2262 Tan-Chr7:74010122 Tan09g1752 Tan-Chr9:69067801 1.40E-21 dispersed
Tan09g1752 Tan-Chr9:69067801 Tan10g0253 Tan-Chr10:2242871 1.10E-25 dispersed
Tan09g1752 Tan-Chr9:69067801 Tan03g1585 Tan-Chr3:72085689 5.50E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28375 PF03106 WRKY 2.30E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1752 - - - 0.0