Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1759 ATGGGAGATCAAGATGAGCTCTGCAACATCAGGCTTGGGCTTGGCCTTGGCCTTGGCTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAACAAAAACAACCCCAAATTCTTCCCTGACCTCTCTTTCACTCTCATTCCAAAGGAAGAATTAGCCATTAACATGGAGGTTGAAGCTAATCATTCAATTAGTAGAAGCAATGAAACTAATTCCCAAGATTCTTCCTTTGGCAACAACAACAACAACAACGCCATTAATGGATCAGAAAGAGAGAGAAAAAAGCTTAGGCTTTCAAAAGAACAGTCCACTTTGCTCGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAGCAGGCACTTGCCCAACAATTAAACCTCAAACCTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGAACGAAATTGAAACAAACGGAAGTAGATTGCGAGTTTTTGAAGAAATGTTGTGAAAGGTTGAATGAAGAGAATCGAAGGTTGAAGAAAGAGTTGCATGAATTAAGATCCATAAAACTTGGAGCTTCACAGTTGTATATTCAGCTGCCAAAGGCGGCGACGCTCACAATTTGTCCCTCATGCGACAAAATTACCAGGACGGCCGCCGCCAACGCCGCCGTGGAGCCCAATTCTCCGCCACAATAA 687 42.79 MGDQDELCNIRLGLGLGLGLGFGEYVPKKMQKINNKNNPKFFPDLSFTLIPKEELAINMEVEANHSISRSNETNSQDSSFGNNNNNNAINGSERERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEPNSPPQ 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69123874 69125221 + Tan0015388.1 Tan09g1759 764102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1759 228 FunFam Homeobox-leucine zipper protein 18 81 157 - -
Tan09g1759 228 Pfam Homeobox associated leucine zipper 152 184 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1759 228 ProSitePatterns 'Homeobox' domain signature. 127 150 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Tan09g1759 228 SMART HOX_1 94 156 IPR001356 GO:0003677(InterPro)
Tan09g1759 228 Pfam Homeodomain 96 150 IPR001356 GO:0003677(InterPro)
Tan09g1759 228 Coils Coil 151 185 - -
Tan09g1759 228 ProSiteProfiles 'Homeobox' domain profile. 92 152 IPR001356 GO:0003677(InterPro)
Tan09g1759 228 MobiDBLite consensus disorder prediction 67 97 - -
Tan09g1759 228 SUPERFAMILY Homeodomain-like 76 153 IPR009057 -
Tan09g1759 228 SMART halz 152 195 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g1759 228 MobiDBLite consensus disorder prediction 67 90 - -
Tan09g1759 228 CDD homeodomain 96 153 IPR001356 GO:0003677(InterPro)
Tan09g1759 228 Gene3D - 100 150 - -
Tan09g1759 228 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 13 217 IPR050762 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1759 Tan-Chr9:69123874 Tan10g0059 Tan-Chr10:933680 8.10E-40 dispersed
Tan09g1759 Tan-Chr9:69123874 Tan06g0528 Tan-Chr6:4040918 1.80E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28376 PF00046 Homeodomain 5.10E-16 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1759 K09338 - csv:101203427 260.766