Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1760 ATGAGGCTAATTCAGTCCAGCATTTTGGTGCTTTCGCTTTCGGTTTTCGTCTGCATTGGCTCCGTCGTTGGAGCTCGGAAGATGTTGTTTTTGGCTCATGACGGTGCTAGAGATGACGACAACAACAGCTTGACGACTGCATTGGAGACAACCAGTATTAACAACAGGTGCAAGTCAAAGAAGAAGCTCTATTGTTGTGAGTGCTTCTTCTCAAGCTCTGAGAAGATGATCAATAATGGCACCAGCCAACTGAGGGATGCCTCGCCGAATACTAGAAGGAACCTCCGAAGGTCAGATGAAGAGCTCTTCATCTCTGCTACATTCTCCAGTTTTCTTCTTTTTCCTTGGGATGCTAGTTGTGCTGCATCAGCAGATTTGTTAAGCGAGAACCTCCACTCAATAAGCTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTAATCCAGAATATCTTCTAGGCCAGGGAGGATTTGGACCCGTCTACCTGGGAACGCTAGAGGATGGAAAGTTGGTTGCAATTAAGAAACTTTCACTTAACAAATCCCAGCAAGGAGAACCAGAATTTCTATCAGAGGTCAGACTGATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCAGATGGGCCTCAACGGCTACTCGTGTATGAATACATGGAGAACAGGAGTTTGGATCTCATGATTTATGGGGGAAGCGACCAATTCCTCAGCTGGAACACCAGATTGAAGATTATCAGAGGCATTGCAAAAGGGTTGCAGTATCTACATGAGGATTCCCATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAGATTCCAGCCAAAGATTGGTGATTTTGGACTGGCCAGGTTCTTCCCTGATGACCAAGCTTACCTAAGCACTACATTTGCTGGAACTTTAGGTTACACAGCACCAGAATATGCAATTAGAGGAGAACTGTCAGAGAAGGCAGATGTATACAGTTTTGGAGTTCTGGTGCTTGAAATCATCAGTGGCAGAAAAAATACAAATCTTTCTTTACCAACCGAGATGCAGTATCTTCCTGAATATGCATGGAAACTATATGAGAGGTCTGCACTAATCGAACTTGTGGATCCAAAGATGAAGGATGATGGATATGTAGAGAAGGACGTAGCACATGCAATTCAGGTTGCTTTGTTATGCCTTCAGCCTCATGGCAATCTGAGACCTGCAATGTCTGAGATTGTTGCCATGCTAACATACAAATTTGAAATCATTCAAACACCTTTGAAACCAGCTTTCTTAGAAAGAAGGCATAAAAGGAACAGAGATCTCTCGTTGACTAATTATGCAGATACCACTCCTCCTTTACAGTGA 1380 43.12 MRLIQSSILVLSLSVFVCIGSVVGARKMLFLAHDGARDDDNNSLTTALETTSINNRCKSKKKLYCCECFFSSSEKMINNGTSQLRDASPNTRRNLRRSDEELFISATFSSFLLFPWDASCAASADLLSENLHSISYFDFHTLKKATKNFNPEYLLGQGGFGPVYLGTLEDGKLVAIKKLSLNKSQQGEPEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMENRSLDLMIYGGSDQFLSWNTRLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDDRFQPKIGDFGLARFFPDDQAYLSTTFAGTLGYTAPEYAIRGELSEKADVYSFGVLVLEIISGRKNTNLSLPTEMQYLPEYAWKLYERSALIELVDPKMKDDGYVEKDVAHAIQVALLCLQPHGNLRPAMSEIVAMLTYKFEIIQTPLKPAFLERRHKRNRDLSLTNYADTTPPLQ 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69133213 69138555 + Tan0010295.1 Tan09g1760 764103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1760 459 FunFam Cysteine-rich receptor-like protein kinase 2 226 428 - -
Tan09g1760 459 CDD STKc_IRAK 155 421 - -
Tan09g1760 459 ProSiteProfiles Protein kinase domain profile. 149 425 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1760 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1760 459 Pfam Protein kinase domain 153 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1760 459 SUPERFAMILY Protein kinase-like (PK-like) 129 421 IPR011009 -
Tan09g1760 459 FunFam Cysteine-rich receptor-like protein kinase 10 115 225 - -
Tan09g1760 459 Gene3D Transferase(Phosphotransferase) domain 1 226 429 - -
Tan09g1760 459 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 60 443 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan09g1760 459 Gene3D Phosphorylase Kinase; domain 1 121 225 - -
Tan09g1760 459 SMART serkin_6 149 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2119 Tan-Chr8:73093997 Tan09g1760 Tan-Chr9:69133213 6.70E-79 dispersed
Tan09g1760 Tan-Chr9:69133213 Tan05g3131 Tan-Chr5:83423345 6.60E-81 dispersed
Tan11g2080 Tan-Chr11:44418662 Tan09g1760 Tan-Chr9:69133213 3.00E-71 dispersed
Tan09g1760 Tan-Chr9:69133213 Tan04g1269 Tan-Chr4:12200508 1.50E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68080 PF00069 Pkinase 6.50E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1760 - - - 0.0